| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0462 |
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| Symbol | |
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| ID | 3676297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 518793 |
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| End bp | 520577 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637712004 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_317081 |
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| Protein GI | 75674660 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCGCT TCGCCGAACT TCTCGACCGT CTCGCCTATG AGCCCGGCCG CAACAACAAG
CTGCGGCTGA TGACGGCCTA TTTTCGCGAG ACGCCGGACC CGGATCGGGG CTACGCACTG
TCCGCGCTCA CCGGCGCGTT GTCGTTCAAG TACGCCAAGT CAGGTCTGGT GCGCGACCTG
ATCGCCGCGC GCGCCGATCC GGTGCTGTTC GCGTTTTCCT ATGATTATGT CGGCGATCTT
TCCGAGACGG TGGCGCTCAT GTGGCCACAA CAGCACCCTC CCGACGCCTC GTCCGTTCTC
TCTGCCGCTC GCGGGAGCGG GACTGGGAAG GCAACGGGCA CAGGTCACGT TCGTCATTGG
CCTTCTCCGA CTCTTACCGA CGTCGTCACC ACGCTGCGCA CGCTCGGCAA GGCCGAACTG
CCGGCGCAAC TTGCGCGCTG GCTCGACCAA CTCGACGAGA CCGGACGCTG GGCGCTCTTG
AAACTCGTCA CCGGCGCGAT GCGGATCGGG GTCTCCGCGC GGCTCGCCAA GACCGCCGTG
GCCGCGCTTG GGAGCAGGGA TGCGCATGAT GTCGAACTGA TCTGGCCGGG CCTCGCGCCG
CCTTATCCCG ATCTGTTCGC CTGGCTTGAG GGCCGCGGCG ACAAGCCGGT CAATCGCGCT
CCCGCGCCGT TCCGGCCGGT GATGCTGGCG CACGCGATCG AAGATGCTGA CTTTGCGCGC
CTGGATGCCA CCGATTTCAC CGCCGAGTGG AAGTGGGACG GCATCCGGGT GCAGGCGGTG
AGGGGCCGCG ATGAGCACGG CAATGTCGAG ACGCGGCTTT ATTCGCGCAC CGGCGAGGAC
ATCACGCACA GTTTCCCGGA TCTGCTGCCC TCGTTGCGGC GCGAAGGTTT TGCCGAAGGA
TGGCTCAACG ACTCGCGGGA ACCGGTCCGC GGTTTTCGTC CGCGGGCTTT CGCCATCGAT
GGCGAACTGC TGGTGGTGCG CGATGGACGG GTGCAGTCGT TCAACGTCCT GCAACAGAGG
CTGAACCGCA AGGCGGTGAC GCCCAGGCTG ATGAAGGAGT TCCCCGTTCG CCTGCGCGCC
TACGATCTGC TCGCCGACGG CGACAATGAT CTGCGCGAGT TGCCGTTTGA AGACCGGCGG
CGGCGGCTTG TTGATTTCAT CGCCGCGCTT GACGACCCGC GTATCGACCT TTCGCCGCAG
GTCTCCTTCG CCACATGGAG CGATCTCGCG GCGATCCGCG CCGATCCGGC CGCGGCGGGC
GCTGACGCCG AGGCTGTCGA AGGCATCATG TTGAAGCGCC GGGACGCGCC TTATATGCCG
GGGCGCCCCA AGGGTCTGTG GTGGAAATGG AAGCGTGATC CGCATGTCAT CGACGCGGTG
CTGATGTATG CGCAGCGCGG CCACGGCAGG CGCTCGTCCT ATTACTCCGA CTACACCTTC
GGAGTCTGGA CCGCGGGAGA GGAGGGCGAG CGGCTGGTGC CTGTCGGCAA GGCCTATTTC
GGCTTCACCG ACGAGGAGCT GCTGCGGATC GACCGTTTCG TCCGCCGCAA CACCACCGAG
AGTTTCGGCC CGGTGCGCCA TGTCCTGCAT GAGCCCGATC AGGGGTTGGT GCTGGAAATC
GCCTTTGAGG GCTTGCAGCG TTCGGCCCGG CACAAGTCGG GGGTGGCGAT GCGTTTTCCG
CGGATCAACC GATTGCGCTG GGACAAGCCA CCGCGCGAGG CGGATCGGCT GGAGACGCTG
GAGCGGATGC TGGCTTCCGA AGCCACCAGA TCAAACGGCC GTTGA
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| Protein sequence | MNRFAELLDR LAYEPGRNNK LRLMTAYFRE TPDPDRGYAL SALTGALSFK YAKSGLVRDL
IAARADPVLF AFSYDYVGDL SETVALMWPQ QHPPDASSVL SAARGSGTGK ATGTGHVRHW
PSPTLTDVVT TLRTLGKAEL PAQLARWLDQ LDETGRWALL KLVTGAMRIG VSARLAKTAV
AALGSRDAHD VELIWPGLAP PYPDLFAWLE GRGDKPVNRA PAPFRPVMLA HAIEDADFAR
LDATDFTAEW KWDGIRVQAV RGRDEHGNVE TRLYSRTGED ITHSFPDLLP SLRREGFAEG
WLNDSREPVR GFRPRAFAID GELLVVRDGR VQSFNVLQQR LNRKAVTPRL MKEFPVRLRA
YDLLADGDND LRELPFEDRR RRLVDFIAAL DDPRIDLSPQ VSFATWSDLA AIRADPAAAG
ADAEAVEGIM LKRRDAPYMP GRPKGLWWKW KRDPHVIDAV LMYAQRGHGR RSSYYSDYTF
GVWTAGEEGE RLVPVGKAYF GFTDEELLRI DRFVRRNTTE SFGPVRHVLH EPDQGLVLEI
AFEGLQRSAR HKSGVAMRFP RINRLRWDKP PREADRLETL ERMLASEATR SNGR
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