| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0434 |
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| Symbol | atpC |
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| ID | 3676608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 489516 |
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| End bp | 489923 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637711974 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_317053 |
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| Protein GI | 75674632 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.639575 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGACTT TCCATTTCGA CCTCGTTTCG CCGGAGAAGC TGGCATTTTC AGGCGAGGTC
GATCAGGTCG ACATACCCGG TGTCGAGGGC GATTTCGGCG TTCTCGCCGG CCATGCGCCC
GTCGTCGCGG CCATCCGTCC CGGAATGCTG ACCGTCACCG CGGGCGGCAC GCAACAGAAG
ATCATCGTGC TTGGCGGTCT GGCCGAGGTG TCGGAGAAGG GTCTGACGGT GCTTGCCGAC
GTGGCGACGT CAATCGAGGA GCTGGACCGC GCGCAGTTCG CTGACACGAT CGCGGGTATG
GAAGCCAGGC TGACGGACAA GGAAGGCTCC GAACTCGACA AGGCGATCGA GCGGCTGGAT
CACTTCAAGA GCATTCAGAG CCAGCTCAAT ACCACGGCCA TGCATTAG
|
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| Protein sequence | MATFHFDLVS PEKLAFSGEV DQVDIPGVEG DFGVLAGHAP VVAAIRPGML TVTAGGTQQK
IIVLGGLAEV SEKGLTVLAD VATSIEELDR AQFADTIAGM EARLTDKEGS ELDKAIERLD
HFKSIQSQLN TTAMH
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