Gene Nwi_0415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0415 
Symbol 
ID3677000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp466263 
End bp466985 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content65% 
IMG OID637711955 
ProductABC transporter, ATPase subunit 
Protein accessionYP_317034 
Protein GI75674613 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.35006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGTC TCATCAAACG CTCGTCTCCA GCCAGCTATT CGGAAATCCC GGACGCCATC 
GCGATTTCAG ATGTCAATCT CACGCTCGGC AGCGGCGCCG CGCGAGTCCA CATCCTGAAG
GACATCAGTC TTCGCATTGC TGCTGCCGAG GCGATCGGTT TGATCGGCCC GTCCGGGTCG
GGGAAATCCA CCCTGCTCAT GGTCATGGCG GGACTGGAAC GTCCCGACAG CGGAGAGGTG
GTGGTCAACG GCACTTCTTT CAATGCTCTC GACGAAGACG GCCTCGCACG GTTCCGCGGG
CGTCATGTCG GCATCGTGTT CCAGTCGTTT CATTTGATTC CGACCATGAC GGCGCTGGAG
AACGTCGCCG TACCGCTCGA ACTCGCCGGC GTCGCGGACG CATCCCAACG CGCGGCGAGC
GAACTGGAGG CGGTCGGTCT CGGCGCGCGG CTGCATCATT ATCCGACGCA GCTATCTGGC
GGCGAGCAGC AGCGCGTGGC GCTGGCGCGG GCGTTCGCGC CCGATCCGGC TATACTCGTC
GCCGACGAAC CGACCGGCAA CCTCGATGAG GCGACCGGCC AGCAGATCGT CGACCTCCTG
TTCGCAAAGC ATGCCGAGCG CGGCATGACG CTGGTGCTGG TGACCCACGA CACCGCGCTC
GCGCAACGCT GCGACCGCGT CGTGAGGCTG CGGTCGGGGC GCATCGACGG AGCAGGTCAA
TGA
 
Protein sequence
MDSLIKRSSP ASYSEIPDAI AISDVNLTLG SGAARVHILK DISLRIAAAE AIGLIGPSGS 
GKSTLLMVMA GLERPDSGEV VVNGTSFNAL DEDGLARFRG RHVGIVFQSF HLIPTMTALE
NVAVPLELAG VADASQRAAS ELEAVGLGAR LHHYPTQLSG GEQQRVALAR AFAPDPAILV
ADEPTGNLDE ATGQQIVDLL FAKHAERGMT LVLVTHDTAL AQRCDRVVRL RSGRIDGAGQ