Gene Nwi_0388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0388 
SymbolargJ 
ID3676973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp432176 
End bp433429 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID637711928 
Productbifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein 
Protein accessionYP_317007 
Protein GI75674586 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1364] N-acetylglutamate synthase (N-acetylornithine aminotransferase) 
TIGRFAM ID[TIGR00120] glutamate N-acetyltransferase/amino-acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.93205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.933531 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCG CCATATCTCC CCTCGCCCCG ACCGACGTCC CGGACCTGCC TGAGATCGCA 
GGCGTTCGAC TTGCGACCGC CGCCGCCGGC ATCCGCTACA AGGGCCGCAC GGACGTGCTG
CTGGCGCTGC TGGACGAAGG CACCACGGTG GCCGGCGTGT TCACCAGATC CCGATGTCCG
TCGGCGCCGG TCGAATGGTG CCGGGCGCGC CTGAAGGACG GCCATCACGC CAAAGCAGGA
CTGGCGCTGG TGGTGAATTC CGGCAACGCC AACGCCTTCA CCGGCAAGAC CGGCCGACAG
GCCACCAAAC TGACCGCCGG CATCGCCGCC AAGGCGGCCG GCTGCAAGGC GTCGGATATC
TATCTCGCCT CAACCGGCGT GATCGGCGAG CCGCTCGACG CCACGAAGTT CAACGGCGTG
CTGGAGACGC TGGCGAGCGA AGCTGCCCCT GACCGCTGGA TGGACGCGGC GCGCGCCATC
ATGACCACCG ACACCTTTCC CAAGGTCGCA ACCGCGCGCG TGAAGCTCGG CAAGGCCGCC
GTCACCATCA ACGGCATCGC CAAGGGTGCC GGCATGATCG CGCCCGACAT GGCAACCATG
CTCTCGTTCA TCTTCACCGA TGCGCCGATT ACGGCGACAG CGCTGCAATC GCTTTTGAAA
AGCGGGGTCG AGGACACCTT CAACGCGGTC ACGATCGACA GCGACACCTC CACCTCCGAT
ACGCTGCTGG CCTTCGCGAC CGGAGCCGCG GGCGCCCGCG GCGCGCCGAG AATTTCTCGC
GCCGGCGATC CGCGCCTGAA AGCTTTCGTG AAAGCCTTTC ACGGGGTGCT GGCCGATCTC
GCCGAACAGG TGGCACGCGA CGGCGAAGGC GCGCGCAAGC TGGTCGAGGT CATCGTCGAG
GGCGCGACCT CGAAGGCTTC GGCGCGAAAA ATCGCCAAGT CGATCGCCAA CTCACCTCTG
GTGAAGACCG CGATCGCCGG CGAGGACGCC AACTGGGGCC GCGTGGTCAT GGCGGTCGGC
AAGGCCGGCG AGCCGGCCGA CCGCGACAAG CTGTCGATCT ATTTCAACGG CATTCGAGTC
GCCAAAAGCG GCGCGCGGGA CCCGTCCTAC GACGAGGCGG AGGTCTCGAA AGCCATGAAG
AACGACAGGA TTCAGATCAA GACGACGCTC GGCCTCGGCA AGGGCCGCGA CCGCGTGCTG
ACCTGCGACC TCACCAAGGA GTATGTCGCG ATCAACGGCG ATTACAGGTC GTGA
 
Protein sequence
MSTAISPLAP TDVPDLPEIA GVRLATAAAG IRYKGRTDVL LALLDEGTTV AGVFTRSRCP 
SAPVEWCRAR LKDGHHAKAG LALVVNSGNA NAFTGKTGRQ ATKLTAGIAA KAAGCKASDI
YLASTGVIGE PLDATKFNGV LETLASEAAP DRWMDAARAI MTTDTFPKVA TARVKLGKAA
VTINGIAKGA GMIAPDMATM LSFIFTDAPI TATALQSLLK SGVEDTFNAV TIDSDTSTSD
TLLAFATGAA GARGAPRISR AGDPRLKAFV KAFHGVLADL AEQVARDGEG ARKLVEVIVE
GATSKASARK IAKSIANSPL VKTAIAGEDA NWGRVVMAVG KAGEPADRDK LSIYFNGIRV
AKSGARDPSY DEAEVSKAMK NDRIQIKTTL GLGKGRDRVL TCDLTKEYVA INGDYRS