Gene Nwi_0376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0376 
Symbol 
ID3676961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp420976 
End bp421872 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID637711916 
Productmodification methylase HemK 
Protein accessionYP_316995 
Protein GI75674574 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2890] Methylase of polypeptide chain release factors 
TIGRFAM ID[TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.146746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.807288 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGACT CATTCGCCGC ACAGACAATA GAGAGCATCC GCCGCGCGCT GACGGCGCGC 
TTCGAAGCCG CCGGAATCGA GAGCGCCGCG CTCGATGCCC GTATGCTCAC CGGCGCGGTG
CTGGACCTCG ACTTGACCGG TCTGATCGCG CAAGGCTTGC GGCAACTCGA CGAAGATGAT
GCGGCGCGGC TCGATGCTTT CGCGCGACGC CGGCTCGCGG GGGAGCCTAT CGCGCGCATC
CTTGGCACGA AGGAATTCTG GGGGCTGCCG CTGAAGCTGT CGGCGGATAC GCTGGTGCCG
CGGGCCGACA CCGAAACCGT GGTCGAGGCC GCGCTCGGCG TCCTCCGCGC TGAAGGCAGG
ACGCAGGAGC CGCTTCGCAT CGCGGACCTT GGCACCGGCA GCGGCGCGAT CCTGCTGGCG
TTGCTGACCG AACTGCCGAA AGCCACCGGC GTCGGCACCG ACCTCAGCGC GGCGGCGCTC
GACACGGCCA GAGCCAATGC GCAAGGCGTC GGCCTCGCGG CGCGCTCGCG CTTTCTGGTC
AGCGATTATG CGGATGGCCT GTCAGGTCAA TTCGACCTGA TCGTCTCGAA CCCGCCCTAC
ATCCGCTCGG CCGACATCCC GACGCTGGCG CCGGAGGTGC GCGATCACGA TCCGCATCTT
GCACTGGACG GCGGCCTCGA CGGGCTCGAC GCCTATCGCC GGATCGCGCC GCGGGCGGCG
GCGCTGCTTG CGGACGGCGG CCTTCTGGTG CTGGAGATCG GGCAAGGCCA GGGCGGCGCC
GTCACCCCGC TGGTGAGCGC CGCGGGATTA ACGGTCATGG GATCCGTAAG GGCTGACCTC
GCGGGTATCG GCCGCGCCGT CGTGGCCGGC AAGATTGCCC TCGGAAAGCC GGATTGA
 
Protein sequence
MADSFAAQTI ESIRRALTAR FEAAGIESAA LDARMLTGAV LDLDLTGLIA QGLRQLDEDD 
AARLDAFARR RLAGEPIARI LGTKEFWGLP LKLSADTLVP RADTETVVEA ALGVLRAEGR
TQEPLRIADL GTGSGAILLA LLTELPKATG VGTDLSAAAL DTARANAQGV GLAARSRFLV
SDYADGLSGQ FDLIVSNPPY IRSADIPTLA PEVRDHDPHL ALDGGLDGLD AYRRIAPRAA
ALLADGGLLV LEIGQGQGGA VTPLVSAAGL TVMGSVRADL AGIGRAVVAG KIALGKPD