Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0315 |
Symbol | |
ID | 3676144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 353099 |
End bp | 353893 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637711855 |
Product | pseudouridine synthase |
Protein accession | YP_316934 |
Protein GI | 75674513 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAAC CGGAAATAAA GCGAACCGTC GATACGGCCC AGCCGACGCC GGAGGAGATC CAGGCCCGCG TCCTCCACCG CGACGGGCTG ATGCTGGTGA TCGACAAGCC CGCGGGCATC GCCGTCCATC GCGGCCCCAA GGGCGGCGCC AATCTCGAAG CGTCGTTCGA CGCGCTGCGG TTCGGCCTGC CGCGGCCGCC GGTGCTGGCC CATCGGCTGG ACCGCGACAC CTCGGGCTGT CTGGTGCTCG GGCGGCACCG CAAGGCGACG GCTTCGCTCG GCCTGCTGTT CAAGCACGGC AAGATTTCAA AGACCTACTG GGCCGTGGTC GAAGGCGGCC CGAGCGAGGA TGAGGGCGCC ATCGATATTC CACTGGGGCG GCTGAACGAA GAACGCGGCT GGTGGCAGAA GCCGGATCCG AACGGGCTGC CGTCGACCAC GAAATGGAAA GTGCTGGGGC GATCCTCTCC TGACACCTCC ACCGTTTCCG GAGCAGGAGT TCAGTTGACC TGGTTGTCGC TGGAACCGCT TACCGGCCGC ACTCATCAAC TGCGCGTCCA TTGCGCGGCG ATGGGCTGGC CGATCGTCGG CGACAACATC TACGGAACCC AGGCCAGTTT ACGCCGTTCG CGGAACGAAC AATACGTCCC GCGCCTCGAC GAGCCGGGCC TGCATCTGCA TGCACGCCAG ATCGCGATTC CGCTGTCGAG GAACAAGCCT CCCGTGGTGG TCACCGCGCC CGCGCCCGCG CATTTGCACG CGCGGCTCAG GGCGTGCGGC TGGAACGCAG AGTAG
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Protein sequence | MPQPEIKRTV DTAQPTPEEI QARVLHRDGL MLVIDKPAGI AVHRGPKGGA NLEASFDALR FGLPRPPVLA HRLDRDTSGC LVLGRHRKAT ASLGLLFKHG KISKTYWAVV EGGPSEDEGA IDIPLGRLNE ERGWWQKPDP NGLPSTTKWK VLGRSSPDTS TVSGAGVQLT WLSLEPLTGR THQLRVHCAA MGWPIVGDNI YGTQASLRRS RNEQYVPRLD EPGLHLHARQ IAIPLSRNKP PVVVTAPAPA HLHARLRACG WNAE
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