| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0225 |
|---|
| Symbol | |
|---|
| ID | 3676682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | + |
|---|
| Start bp | 256939 |
|---|
| End bp | 257877 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637711764 |
|---|
| Product | protoheme IX farnesyltransferase |
|---|
| Protein accession | YP_316845 |
|---|
| Protein GI | 75674424 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
|---|
| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCGGTTG TCGATCAAAA AGCCGTTGAG CTGCCGCCCC GGATCTCGGA GGCGGGTGTC
GCCGATTACT TCGCGCTGCT GAAGCCACGA GTGATGTCGC TCGTGATCTT CACCGCGCTG
GTCGGGCTGA TGATTGCGCC GGGCCATATT CACCCGGTGC TGGGCTTCAT CGCGATCCTG
TGCATCGCGG TCGGAGCCGG CGCCTCCGGC GCGCTGAACA TGGCGCTGGA AGGCGATATC
GACGTGCTGA TGTCGCGCAC GGCCAACCGG CCGATCCCGC GCGGCCGCAT CACCCGCGGC
GAGGCGATGG GGTTCGGCCT CACGCTGTCG TTCTTCTCGG TGATGACGCT CGGCGCGCTG
GTCAACTGGT ACGCCGGGGG GCTGCTCGCC TTCACGATCT TCTTTTACGT GGTGATCTAC
ACGATGGGGC TGAAGCGGCG GACCGCGCAG AACATCGTGA TCGGCGGCGC CGCCGGCGCG
CTGCCGCCGG TGGTGGCGTG GGCGGCCGCG ACGGGGTCGT TGTCGGTTGA GCCGCTGCTT
CTGTTCTTGA TCATCTTCTT CTGGACGCCG CCGCATTTCT GGGCGCTGGC GCTGTTCCGC
TCCGACGATT ACGCCCGCGC CGGGGTGCCG ATGCTGCCGG TGGTCGCCGG TCCCGACGCG
ACGCGGCTGC AGATCCTGCT CTACACCATC GTGCTGGTGG CGATCGCCGC CGCGCCCTGG
CCGCTCGGCT ACTTCGACTG GGTCTATGGC GTCACCTCGC TGATCCTCGG CGCCGGCATG
CTGGTGCTCG CGATCGAGGT CTATCGCCAC CGGACCGGAA GCCAGGCGCT GCGCGCCACG
CGGCGGCTGT TCGCCTTCTC GATTCTCTAT CTGTTCGCGC TGTTCGCCGT TCTGCTGCTC
GATGTGGTCG CGAAGGCCGT CGCGCCGTTG ATCTGGTAG
|
|---|
| Protein sequence | MSVVDQKAVE LPPRISEAGV ADYFALLKPR VMSLVIFTAL VGLMIAPGHI HPVLGFIAIL
CIAVGAGASG ALNMALEGDI DVLMSRTANR PIPRGRITRG EAMGFGLTLS FFSVMTLGAL
VNWYAGGLLA FTIFFYVVIY TMGLKRRTAQ NIVIGGAAGA LPPVVAWAAA TGSLSVEPLL
LFLIIFFWTP PHFWALALFR SDDYARAGVP MLPVVAGPDA TRLQILLYTI VLVAIAAAPW
PLGYFDWVYG VTSLILGAGM LVLAIEVYRH RTGSQALRAT RRLFAFSILY LFALFAVLLL
DVVAKAVAPL IW
|
|---|
| |