Gene Nwi_0216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0216 
Symbol 
ID3676673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp245916 
End bp246959 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content61% 
IMG OID637711755 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_316836 
Protein GI75674415 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC GGGTTTTTTC AGGCGTTCAG CCGACCGGCA ATCTGCATCT CGGCAATTAT 
CTCGGCGCCA TCGTTAATTT CGTGAAGTTG CAGGCTGACC ACGAGTGCCT TTATTGCGTG
GTCGATCTGC ATGCCATCAC CGTGCCCGTC GCCGTCTGGG GCGGGCCCGA CGAGTTGCGC
CGCGCCACCC GCGAAGTGAC GGCGGCCTTC ATCGCAAGCG GCATCGATCC GAGGCAGCAC
ATCATCTTCA ACCAGAGTCA GGTGGCCGGA CACGCCGAGC TGGCGTGGGT GCTCAATTGC
GTGGCGCGGC TCGGCTGGCT CAACCGCATG ACCCAGTTCA AGGAAAAGGC CGGCAAGGAT
CGCGAGAACG CCTCGGTCGG GCTTTACGAT TACCCGGTGC TGATGGCGTC GGATATCCTG
GTCTATCGCG CCACCCACGT TCCGGTCGGC GAGGATCAGA AACAGCATCT CGAACTCAGC
CGCGACATCG CGCAGAAATT CAACAACGAC TTTTCGGAAT CGATCGCCGC CAACGGCCAT
GGCGACATGT TCTTTCCGCT GCCGGAGCCC GTGATCACCG GACCCGCGAC GCGCGTGATG
AGTCTGCGCG ACGGCACCAA GAAAATGTCG AAGTCGGATC CGTCAGATTA TTCGCGCATC
AATCTGACTG ACAACGCCGA TACCATCGCG CAAAAGATTC GCAAGGCCAA GACCGACCCC
GAGCCGCTGC CGTCGGAGGA AAAGGGGCTG GAAAACCGCC CCGAGGCCGA CAATCTGGTC
GGCATCTACG CGGCCCTGTC GGGGAAGCCC AAGTCCGCGT TGCTCGCTGA GTTCGGCGGC
GCGCAGTTCT CAAGCTTCAA ATCCAGCCTT GTCGATCTCG CGGTCGCGAA GCTGTCGCCG
ATCGCTCACG AAATGAAGCG GCTCACCGAC GATCCGGCCC ATGTCGACCG GATTTTGATC
GAGGGCGCCG AACGCGCCAG CGCGATCGCA TCGCAGACCA TGGACGCGGT GAAGGACATC
GTCGGCTTCA TCCGCAAGCG CTAG
 
Protein sequence
MTTRVFSGVQ PTGNLHLGNY LGAIVNFVKL QADHECLYCV VDLHAITVPV AVWGGPDELR 
RATREVTAAF IASGIDPRQH IIFNQSQVAG HAELAWVLNC VARLGWLNRM TQFKEKAGKD
RENASVGLYD YPVLMASDIL VYRATHVPVG EDQKQHLELS RDIAQKFNND FSESIAANGH
GDMFFPLPEP VITGPATRVM SLRDGTKKMS KSDPSDYSRI NLTDNADTIA QKIRKAKTDP
EPLPSEEKGL ENRPEADNLV GIYAALSGKP KSALLAEFGG AQFSSFKSSL VDLAVAKLSP
IAHEMKRLTD DPAHVDRILI EGAERASAIA SQTMDAVKDI VGFIRKR