Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0183 |
Symbol | |
ID | 3676639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 207838 |
End bp | 211017 |
Gene Length | 3180 bp |
Protein Length | 1059 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637711721 |
Product | Sel1 repeat-containing protein |
Protein accession | YP_316803 |
Protein GI | 75674382 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.536181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTCGC GGGGATCGTC GAGCGACGAC GGAATCGAAA CATCCGATCG CGAGGGAGCG GACGCTGCCG CGCGGCGCGC CGGCACATCC CGCGACGACG GACCGGGTTC CGGTTCCGGC GGCACCCCGC CGGGTCCGAC GCAGCCGGCG GCATCTCCCC AGAACAGCCC CGAGATGAGG GACATTCATC AACGGCTAGA TTCCATCACC CGCCAGATCG ATCAGTTGGC AAGCCCGGCC GAGAACGGCG AACCCGCGGT CGCCCGTCAG CTCAACGACG CCATTTCGCG GCTCGATGCC CGGCTCGCCC GGGTCACGGC CCAGACACCC GCAGCGAACC CGCAGCAACG GGGCGCGAGC GGAAGCTACG ACCGACCGAC ATCACCGGAC CTCGTCACGC TCGAATCCGC GATCGCGGAG ATCGCCGCGC GCCAGCATGA ACTCGATGAG ACGCCGCGCG CGCCATCCTC ATACAGCTCA GCCCCCGTTG CGTCCGCGAT GAGAACGTCG CGACAGGCGG ATTTCTCCAG CCTCGAACGG CAACTCTTCA AGATCACGAG CCAGATCGAA TCCCTGCAAC GCCCCGACGG GATCGAGCAG TCGATCGCCG CATTCCGCAT CGAGCTTGCG GATATCCGTC ATGTGATCAC CGAGGCCATG CCGCGCAGGG CGATCGAATC CCTCGAAAAC GAGATTCGCT CGCTTTCGCA GCGCATCGAC GAAGTCCGCC AGAACGGCAG CGATGGTCAG GCGCTGGCGA ATATCGAACG CGCCCTCAAG GAGATCTACG ACGCTTTGCG ATCGCTGAAG CCGGCGGAAC AGCTCTCAGG ATTCGACGAG GCCATCCGCA ATCTCGGCAA CAAGATCGAT TCGATCGTGC GGGGCAGCGG CGACAGCGGC ATGATGCAGC AGCTTGAGAG CGCGATCGGC GCGCTTCGCG GCATCGTCTC GAACGTCGCC TCCAACGACG CGCTGGAGCG CCTCGGCAAC GATCTCAACA TGCTGTCGTC CAAGGTCGAG CAGCTCGGCC GGCCCGCGGG CGACGGGGAT TTCTACGCCG CGCTCGAACA GCGCATGGCC GCATTGACGC AGACCCTGGA AAACCGCGAA AGCCCGGCCT CGGGCAGCAG CTTCGAACAA CTTGAAGAGA CGGTGCGAGC GCTGTCCGAG CGTCTCGACC GCCTGCCGGC CGGTCACGAT TCGTCCTCGG CGCTGGCGCA CCTCGAACAG CGGGTCTCGA TGCTGCTCGA ACGCCTGGAG ACCGCAGGCG AATATTCAGG ATCCCATCTC GGGCGCGTCG AGGAAGGTTT GCAGGACATT CTGCATTGCC TGGAACGGCA GCAGGCCGGA CTCGCGGCGA TGTCCGAAAG CGGTCCGCGA AGCGCTGTCC CGACCATGGA TAGCGAGGTC GTGGAAGCGA TCAAGCGCGA ACTATCCGAG ATGCGCTTCT GCCAGTCGGA AACCGACCGC CATACCCAGG ACTCGCTCGA GGCCGTTCAC AACACCCTGG AGCATGTGGT CGACCGGCTG GCGATGATCG AAAGCGACCT TCGCGCGGTA CACACCATGC CCGCCCGTGC CGAGCCGTCC CGCGGCGGAA TAATGCCGGA ACGGACGGCA AATCTGCCGC CCAAACCCGA ATTGCCGAAT CCGGTACTGT CGCAAGCGGC CACGCAGCCC ACGCCGGCCC GCACCGCCAC GGCGGCGCCG ATCCCGCGCG CCATAGCCGA CGCCCTGATC CCCAAAGAGA CCTTCGATCC GGATCGCGTC GTGCCATCCA CGACAGCGCC CTCGCCGCGC CCCGCGATCG ACCCGAAGCT GCCGCCCGAT CATCCACTCG AGCCCGGCAC CCGTCCGGCG GGACGCGCGG CAACGCCGTC GGAGCGCATC GCGGCCTCCG AGAGCGAGAC CGGCGACGTC GCCGAAACCC CGCGCGAGCA GTCGGGCTCG TCCTTCATCG CCGCCGCGCG CCGCGCGGCG AAGGCGGCCG CCGCCTCCAC GCCGTCGCCC GACAAGGCGG GTCGAACCAA GGTCGCCATC GAACCGGCGC GCCCCGCCAC GGGCGGATCG GACATCACCT CCAAGATCCG TTCCCTGCTC GTTGCGGCGA GCGTGGTGGT GATCGTCCTC AGCAGTTTCA AGTTCGCGAT GACCCTGCTC GACAGTTCTC CGCGCGCCAC CCTCAGCGAA AGCGACCACG CGGCTCCCGT GACCAAGCCG CCAGCCGACC CCGAGGGCAG CGCCGGCCCA GAGATACCGC AGCCGCCCTC GATGATCGCG CCGACGCCGA TCGATCGGCA ATCGATGATC GCACCGCCCG CCGGTGACAG CGCGGCTCCG GCCAAAAACC CCTCGGATGC CATGCCGGCG AGCCGGCCGG ACACGCCGTC CGCCGACGTC ACCGGTGCGA TCCCGAACGG ACTCACGCCG GAACCGGCTG CAACTCCACC CGCCGCATCG CTTCCCGACA GCATCGGCGG CACGACGCTG CGTTCCGCCG CGCTCCAGGG CGACCCCGCA GCCTCGTTCG AGGTCGGTGT TCGCTACGCC GAAGGAAAGG GCGTGACCGT CAACTACGAC GAAGCCGCGA AGTGGTACGA ACGGGCGGCT CATGCCGGCA TCGTGCCCGC CATGTTCAGG CTTGGCGCCC TGCATGAAAA GGGGCTCGGC ACGAGCAAGG ACGTCGATAC CGCGCGGCGC TATTACCTGC AGGCGGCGGA CCGGGGCAAT GCCAAGGCGA TGCACAACCT CGCCGTGCTC GATGCCGATG GTGGCGGCAA GGGCGCCGAC TATGTGAGCG CCGCGCAATG GTTCAGCAAG GCGGCCGAGC GTGGAATAGC CGACAGCCAG TACAATCTCG GCATTCTTTA CGCCCGCGGC ATCGGCGTCG AACAGAATCT CGCGAAATCC TACAAGTGGT TCAGCCTCGC CGCCGCCCAG GGTGACGTGG ACTCAGGGCG CAAGCGCGAT GAAGTCGCCA AGCGGCTCGA TCCGCCGTCG CTTGCCGCCG CCAAGCTCGC GGTTCAAACC TTCGTGGTCA CGCCGCAGCC CAGCGATGCG GTCAGCGTTC CCGGCCCCGC GGGCGGATGG GACAGCGCGG CTGCAAAGCC CCGCGCCAAA CCGGCGCCGG GCAAATCCGC GAGGGCGAAC CACGCGATGG CGCGGCATAC CGCGCATTAA
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Protein sequence | MNSRGSSSDD GIETSDREGA DAAARRAGTS RDDGPGSGSG GTPPGPTQPA ASPQNSPEMR DIHQRLDSIT RQIDQLASPA ENGEPAVARQ LNDAISRLDA RLARVTAQTP AANPQQRGAS GSYDRPTSPD LVTLESAIAE IAARQHELDE TPRAPSSYSS APVASAMRTS RQADFSSLER QLFKITSQIE SLQRPDGIEQ SIAAFRIELA DIRHVITEAM PRRAIESLEN EIRSLSQRID EVRQNGSDGQ ALANIERALK EIYDALRSLK PAEQLSGFDE AIRNLGNKID SIVRGSGDSG MMQQLESAIG ALRGIVSNVA SNDALERLGN DLNMLSSKVE QLGRPAGDGD FYAALEQRMA ALTQTLENRE SPASGSSFEQ LEETVRALSE RLDRLPAGHD SSSALAHLEQ RVSMLLERLE TAGEYSGSHL GRVEEGLQDI LHCLERQQAG LAAMSESGPR SAVPTMDSEV VEAIKRELSE MRFCQSETDR HTQDSLEAVH NTLEHVVDRL AMIESDLRAV HTMPARAEPS RGGIMPERTA NLPPKPELPN PVLSQAATQP TPARTATAAP IPRAIADALI PKETFDPDRV VPSTTAPSPR PAIDPKLPPD HPLEPGTRPA GRAATPSERI AASESETGDV AETPREQSGS SFIAAARRAA KAAAASTPSP DKAGRTKVAI EPARPATGGS DITSKIRSLL VAASVVVIVL SSFKFAMTLL DSSPRATLSE SDHAAPVTKP PADPEGSAGP EIPQPPSMIA PTPIDRQSMI APPAGDSAAP AKNPSDAMPA SRPDTPSADV TGAIPNGLTP EPAATPPAAS LPDSIGGTTL RSAALQGDPA ASFEVGVRYA EGKGVTVNYD EAAKWYERAA HAGIVPAMFR LGALHEKGLG TSKDVDTARR YYLQAADRGN AKAMHNLAVL DADGGGKGAD YVSAAQWFSK AAERGIADSQ YNLGILYARG IGVEQNLAKS YKWFSLAAAQ GDVDSGRKRD EVAKRLDPPS LAAAKLAVQT FVVTPQPSDA VSVPGPAGGW DSAAAKPRAK PAPGKSARAN HAMARHTAH
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