Gene Nwi_0179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0179 
Symbol 
ID3676635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp204654 
End bp205115 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID637711717 
ProductPTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_316799 
Protein GI75674378 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.149895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.602434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATTA CGGATCTGGT CGCACCCGAG GCGATCCTTC CCGCTTTGAA AGTCACCAGC 
AAAAAGCAGG CGCTGCAGGA ACTGGCGGCG CGCGCTGCGG AACTCACAGG GCAGAACGAC
CGCGCGATCT TCGAGGTGCT GCTGCGGCGC GAGAAGCTCG GGACCACCGC GGTCGGCTAT
GGCGTTGCGA TTCCGCATGG CAAGCTGCAG AAGCTTGAGA AGATTTTCGG TCTTTTCGCG
CGACTCGAAC GTTCGATCGA TTTCGAAGCG ATGGACGGGC AGCCGGTCGA TCTGATCTTT
TTGCTGCTCG CTCCCGAAGG CGCGGGCGCG GATCATCTGA AGGCGCTGGC GCGCATCGCA
CGGCTCTTGC GCGATCAGGA CATCGCCAAC AAGCTGCGCG CCTCGCGCGA CGCGGAGGCG
ATCTATTCCG TGCTGGCGCT GCCGCCAGCG ACGGTCCCCT GA
 
Protein sequence
MMITDLVAPE AILPALKVTS KKQALQELAA RAAELTGQND RAIFEVLLRR EKLGTTAVGY 
GVAIPHGKLQ KLEKIFGLFA RLERSIDFEA MDGQPVDLIF LLLAPEGAGA DHLKALARIA
RLLRDQDIAN KLRASRDAEA IYSVLALPPA TVP