Gene Nwi_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0088 
Symbol 
ID3675053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp104886 
End bp105455 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content69% 
IMG OID637711624 
Producthypothetical protein 
Protein accessionYP_316708 
Protein GI75674287 
COG category[S] Function unknown 
COG ID[COG3786] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.600446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0826635 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCT CATACTCTTC AATGCCTTGT ACCACAAATT CCTGCGATCG GCCGCTCGCG 
GCGATCCGCA TCCGGGCGGC CGCCGGGCGA CCGCAGCGAG GCTGGCTGAT CGCCGAGGGG
CGGGCGATCG CGGTGGCGCT CGGCCGCGGC GGCATTCGGG CCAACAAGCG CGAGGGCGAC
GGCGGCACCC CGAAAGGCAT TTTCCGGCCC GTCCGGTTAT GGTGGCGGCC CGACCGGCAC
CCGCGGCCAC GGACGTTTCT GCCGGTCCGC GCCATCACGC CCATGGATGG CTGGTGCGAG
GACCCCGCCG ACCGGCGCTA CAACCGACCG ATCCGGCTGA CGCCCCATGC GACCGGCGAC
CGGCTGTCGC GCGACGATCA TCTCTATGAC TTCATCATCG AGATCGATCA CAACACCCGC
CCCCGCGTCG CGGGGCGCGG CAGCGCCGTA TTCCTGCATC TGGCGCGCGA CAACTTTGGC
CCGACCGCCG GATGCGTGGC GATGACGCGC CCCGCCATGC TGCGGCTGTT GCGGCGGATA
GGCCCATGTA CGAAAATCGT AATCGGGTAG
 
Protein sequence
MQSSYSSMPC TTNSCDRPLA AIRIRAAAGR PQRGWLIAEG RAIAVALGRG GIRANKREGD 
GGTPKGIFRP VRLWWRPDRH PRPRTFLPVR AITPMDGWCE DPADRRYNRP IRLTPHATGD
RLSRDDHLYD FIIEIDHNTR PRVAGRGSAV FLHLARDNFG PTAGCVAMTR PAMLRLLRRI
GPCTKIVIG