Gene Nwi_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0087 
Symbol 
ID3675052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp103980 
End bp104666 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content64% 
IMG OID637711623 
Producttranscriptional regulatory protein 
Protein accessionYP_316707 
Protein GI75674286 
COG category[T] Signal transduction mechanisms
[K] Transcription 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.701272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0818275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAACG CCCGCAAAAT CCTGATCGTG GACGACGATA ACGACCTGCG CGATACGCTG 
GTCGAGCAAC TGTCGCTGCA TGAGGAATTC GAGGCGTCCG CCGTGGATAC CGGCGCGAAG
GGCGCCAGCG CCGCCAGATC CTGTTCGCCC GACCTCGTGC TGATGGACGT CGGCCTGCCG
GATACGGACG GGCGCGAAGT GGTGCGCAGC CTGCGCAAGG GCGGCTTCAA GGCTCCGATC
ATCATGCTCA CCGGTCACGA CACCGATTCG GACACCATTC TGGGTCTTGA GTCCGGCGCC
AACGACTATA TCGCCAAGCC GTTCCGGTTC GCGGTCCTGC TGGCGCGCAT CCGCGCGCAG
TTGCGCCAGC ACGAGGCCAG CGAGGACGCG GTGTTCTCGG TCGGACCCTA CAGTTTCCGC
CCCGGCGCCA AGATGCTGAC GACCGGCAAT GGCAAGAAGG TGCGGCTGAC CGAGAAAGAG
ACGGCGATTT TGCGCTTCCT GTACCGGGCA GGCCAGATGT CGGTGTCGCG CGACACCCTG
TTGCAGGAGG TCTGGGGATA CAACTCCGGC GTCACCACCC ACACCCTGGA AACCCACATC
TACCGGTTGC GTCAGAAGAT CGAGAAAGAC GCCGCCAATC CGGAAATTCT GGTCACGGAG
GCCGGCGGCT ACAAGCTGGT GCCCTGA
 
Protein sequence
MANARKILIV DDDNDLRDTL VEQLSLHEEF EASAVDTGAK GASAARSCSP DLVLMDVGLP 
DTDGREVVRS LRKGGFKAPI IMLTGHDTDS DTILGLESGA NDYIAKPFRF AVLLARIRAQ
LRQHEASEDA VFSVGPYSFR PGAKMLTTGN GKKVRLTEKE TAILRFLYRA GQMSVSRDTL
LQEVWGYNSG VTTHTLETHI YRLRQKIEKD AANPEILVTE AGGYKLVP