Gene Nwi_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0071 
Symbol 
ID3675629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp82679 
End bp85012 
Gene Length2334 bp 
Protein Length777 aa 
Translation table11 
GC content65% 
IMG OID637711606 
Producthypothetical protein 
Protein accessionYP_316691 
Protein GI75674270 
COG category[S] Function unknown 
COG ID[COG3673] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.303295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.035165 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGC GAACGACGCC CCAACGGGCG TCGTTCGTTT TGGAACAAGA GTGCAGGGAT 
CAACATCGGG CGAACATCGT TCCGGGAGCT GGCATGGGCC GGAAAATCGT TCTGCTGTCC
GACGGCACCG GAAATTCCGC GGCGAAAGTC TGGCGCACCA ATGTCTGGCG CACGTTCGAG
GCGCTCGATG TTTCGGGATC GGATCAGGTC GCGTTCTACG ACGATGGCGT GGGCACCTCG
TCGTTCAAGC CGCTGGCGAT GCTCGGCGGC GCCTTCGGCT TCGGGCTGAA ACGCAACGTC
ATCGACATCT ACAAGTTCGC CTGCCGCAAC TGGCGCGACG ATAGCGACGA GATCTTCGGT
TTCGGCTTCA GCCGGGGCGC CTTCACCATT CGCGTGGTGA TGGGGTTGAT TCTCAATCAG
GGACTGATCG TCGCCGCCAC CGAGAAGGAA CTGGACCGCA AGGCGCGCGC CGCCTATCGC
GCCTATCGCC GCGAGCGCTA TCATACCGTC TGGCGCGTCG AGCATCTGTT CCGGAGCTTG
CGCGATCTGG TGCGGCGCGA CGATTACGAC AAGGCGGACA ATCGCGTGAT CCAGCGCATC
CGCTTCATCG GCGTGTGGGA TACGGTCGCC GCCTACGGGT TGCCGATCGA CGAGATGACG
CGAGGGATCA GCCGCTTCAT CTGGCCGCTG CAATTTCCCG ACCACAGGCT CGATCTGACG
CGGGTGGTGC GGGCCTGCCA GGCGCTGTCG ATCGACGAGG AGCGAACCAC TTTTCATCCC
GAACTGTGGG ATGAGTGCGG CGCACGGTCC GCCTCGCCAC GGCGGGACGG CGAGCGCTAT
CTCGCCGACG AGCAGGTGAG TCAGGTCTGG TTTCCCGGCG TTCACTCCAA TGTCGGGGGC
GGCTATCCGG ACGATTCGCT GGCCTATATC CCGCTGGTCT GGATGCTGCG GGAGGCCGAG
GCCTGCGGCT TGCGCTTCAA GTCGGATCAG GGGACTCCGC CGGCCGATCC CGACACCTTC
AAGCATGCCA TCGTCAACTG CGACAAGGAC GGCCGGCTCT ATGATCCGCG CAAGGGCGTT
GGCGGCTACT ATCGCTACGG CCCGCGCAAG ATTGAGCTTC TCTCCAACTA TATTTACGCG
AAACGCGACG TGGTGTCGGT GGCGCGGCCG AAGGTTCACG AGAGCGCCTT ATGCCGCATC
GCGAGCCGCG TCCATGCCTA TGCGCCGGTG GGGCTTCCGG CGGTTTACGA TGTCGCGACT
TACGACGGGC GGATCGTCAC GCCGGATGCG TTCGGGCTTG AGACCTCGGG CGAGGCGGCG
ACGCGCGCCG AGGCGCAGGA GCACGTCTGG AACGAGGTGT GGAAGCGGCG CATCGTCTAC
TTCCTCACCG TCGGCGTTTC GCTCTGGCTC GCGCTGTATC CGCTGTTGCG CAAGCTGCCG
GCCAAGGACG AGTATCTCAG CCCGTTCCGC TGGATCTCGG ACATCATCCG CCTGGTCGGC
GGCTTCCTGC CGGGATTCGC GCAGACCTGG ATCGACGGCT ACGCCCGCAG CCCGGTGCAG
TTTTCACTTC TGTTCGCCGC CGTGATCGTG CTGATCGCCT GGAGCGGGCG GCTCGCGGCC
GGCATCTCCG ATACGATGGG TGCGATCTGG CGGCGCGCGC CGTCCGCGCC CGTCACGCGC
CCGACAAACT GGATTTATCG GCTGCGCACC AGCCGCATCT ACACCGCTTT TCACGACTGG
CTGAAGCGGC GCGGCGCGCC GGCGTTCTTC GCGCTCCTGT TTGTCTATCT AGGCGTCACG
CTGACGAGCC ATCTCCTTTA TAATGTGCAG GACATCGCGG GCTTCACCTG TCGGGAGAGC
CCGGACACTA AAAGGCTGGC GCGCGGCGAG GAGGCCAGCG CGACCTTCGC CACCTCCGGC
CTTTGCAACA ACACCGGCAT ATTCGTCGAA GGCAACGGAG CGCGCTATCT GGTCAAGGTG
GAAACCACCG AGCCGTTCCG TGACGGCGGC ATTGCGTCCC CGCTCGGCGG CTTCTACTCG
ACCGATGCGC CGGACTGGCA TCAGCAGCTT GCGCTGGTGC TCGGCGTCCC CTTGCGCCGC
GAACTGACGC GGCCGTGGTT CCGTCTGGTG TTGCGCTACG GCGCGGTCGG CGGCGAAGAA
GTGTTTCTCG ATCCCGATCC CGAAGACGGC ACCATCGAGG CGGTGATCCG TCCGACGCGC
AGCGGCGAGC TGCTCGTGTT CGTCAACGAT GCGGTGCTGG GCGTTCCCGG TTTCTACGAC
ACGTTCTACC GCAACAATGA AGGCGCGGCC AAACTCATCG TGAAGCGCAG ATGA
 
Protein sequence
MPMRTTPQRA SFVLEQECRD QHRANIVPGA GMGRKIVLLS DGTGNSAAKV WRTNVWRTFE 
ALDVSGSDQV AFYDDGVGTS SFKPLAMLGG AFGFGLKRNV IDIYKFACRN WRDDSDEIFG
FGFSRGAFTI RVVMGLILNQ GLIVAATEKE LDRKARAAYR AYRRERYHTV WRVEHLFRSL
RDLVRRDDYD KADNRVIQRI RFIGVWDTVA AYGLPIDEMT RGISRFIWPL QFPDHRLDLT
RVVRACQALS IDEERTTFHP ELWDECGARS ASPRRDGERY LADEQVSQVW FPGVHSNVGG
GYPDDSLAYI PLVWMLREAE ACGLRFKSDQ GTPPADPDTF KHAIVNCDKD GRLYDPRKGV
GGYYRYGPRK IELLSNYIYA KRDVVSVARP KVHESALCRI ASRVHAYAPV GLPAVYDVAT
YDGRIVTPDA FGLETSGEAA TRAEAQEHVW NEVWKRRIVY FLTVGVSLWL ALYPLLRKLP
AKDEYLSPFR WISDIIRLVG GFLPGFAQTW IDGYARSPVQ FSLLFAAVIV LIAWSGRLAA
GISDTMGAIW RRAPSAPVTR PTNWIYRLRT SRIYTAFHDW LKRRGAPAFF ALLFVYLGVT
LTSHLLYNVQ DIAGFTCRES PDTKRLARGE EASATFATSG LCNNTGIFVE GNGARYLVKV
ETTEPFRDGG IASPLGGFYS TDAPDWHQQL ALVLGVPLRR ELTRPWFRLV LRYGAVGGEE
VFLDPDPEDG TIEAVIRPTR SGELLVFVND AVLGVPGFYD TFYRNNEGAA KLIVKRR