Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_0055 |
Symbol | |
ID | 3676494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 66899 |
End bp | 68143 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637711590 |
Product | tryptophan synthase subunit beta |
Protein accession | YP_316675 |
Protein GI | 75674254 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0133] Tryptophan synthase beta chain |
TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.660106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.224738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCTC TCCCCAATTC TTTCCGGTCC GGCCCCGACG AGCGCGGGCA TTTCGGCATG TTCGGCGGCC GCTTCGTGGC GGAAACGCTG ATGCCCTTGA TCCTCGATCT TGAGAGGGCC TATGCCGACG CCAAAAGCGA CGCCGCGTTC CAGCGCGACA TGGCGCGCTA TCGCAAGGAC TATATCGGCC GGCCGTCGCC CCTGTATTTC GCCGAGCGTC TGACCGACCA CCTTCGGGAG ATTTCCGCGG CCTCGGGCGG CGCCGGCGGC GCAAAAATCT ACCTGAAGCG CGAGGAGCTC AACCACACCG GCTCGCACAA GGTCAACAAT GTGCTGGGCC AGATTCTGGT GGCGCGGCGC ATGGGCAAGA AGCGCATCAT CGCCGAGACC GGCGCGGGCC AGCACGGCGT CGCCACCGCG ACGCTGTGCG CGCGCTTCGG CCTGGACTGC GTGGTCTATA TGGGTGCGGT GGACGTGGCG CGGCAGGAGC CGAACGTCAT CCGCATGGAA ATGCTGGGGG CGAAAGTGGT GCCGGTGCAG TCCGGCACCC GGACACTGAA GGATGCGATG AACGAGGCGC TGCGCGACTG GGTGACCAAC GTGCACGACA CCTTCTATTG CATCGGTACG GTGGCGGGGC CGCATCCCTA TCCGATGATG GTGCGCGACT TCCAGTCGAT CATCGGCGAG GAAACACGAC GGCAGATGCA GGAGGCGGAA GGCCGTCTGC CGGATTCGCT GATCGCCTGC ATCGGCGGCG GCTCCAACGC GATGGGATTG TTTCATCCCT TCCTCGATGA ATCCTCGGTG GAGATTTTCG GCGTCGAGGC GGCGGGACAC GGGCTCGACA AGCAGCACGC GGCCTCGCTC ACCGGCGGGC GGCCCGGCGT GCTGCACGGT AATCGCACCT ATCTCCTGAT GAATGGCGAC GGTCAGATTG AGGACGCGCA TTCGATTTCC GCAGGCCTGG ACTATCCCGG CATCGGGCCG GAGCATTCAT GGCTGCACGA GACCGGCCGC GTCACCTATC TTTCCGCGAC CGACGAGGAA GCGCTTGGCG CGTTTCAACT GCTGTCGCGG CTGGAAGGCA TCATCCCGGC GCTGGAATCG GCGCATGCGA TCGCGCGCGT CATCGAACTC GCGCCAGGGC GGACGAAGGA TCACCTGATG GTGGTCAACC TCTCGGGCCG CGGCGACAAG GACGTGCCGC AGGTCGGCGA TATCCTGAAG GGCAGGAAGA AGTGA
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Protein sequence | MSSLPNSFRS GPDERGHFGM FGGRFVAETL MPLILDLERA YADAKSDAAF QRDMARYRKD YIGRPSPLYF AERLTDHLRE ISAASGGAGG AKIYLKREEL NHTGSHKVNN VLGQILVARR MGKKRIIAET GAGQHGVATA TLCARFGLDC VVYMGAVDVA RQEPNVIRME MLGAKVVPVQ SGTRTLKDAM NEALRDWVTN VHDTFYCIGT VAGPHPYPMM VRDFQSIIGE ETRRQMQEAE GRLPDSLIAC IGGGSNAMGL FHPFLDESSV EIFGVEAAGH GLDKQHAASL TGGRPGVLHG NRTYLLMNGD GQIEDAHSIS AGLDYPGIGP EHSWLHETGR VTYLSATDEE ALGAFQLLSR LEGIIPALES AHAIARVIEL APGRTKDHLM VVNLSGRGDK DVPQVGDILK GRKK
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