| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0050 |
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| Symbol | |
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| ID | 3676489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 59255 |
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| End bp | 62863 |
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| Gene Length | 3609 bp |
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| Protein Length | 1202 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637711585 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_316670 |
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| Protein GI | 75674249 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.253682 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGAAAG CGCCGCGCCC CGTTCATCCC GACGCCAGCG CGCGCCAGCA GCGTGCGTCC
GATCCGGCCA CATCGGTGTT CGTGTCGGCC AACGCGGGAT CGGGCAAGAC GCACGTTCTC
GTTCAGCGCG TGATCCGCCT TCTGCTCAAC GACGTCGACC CCGCGCGCAT CCTCTGCATC
ACCTTCACCA AGGCCGCCGC CGCGAACATG GCGGAGCGGG TATTCTCGAC GCTGGGTCAC
TGGGTCACGC TCGACGATGA GGCCTTGAAC GGGGCGCTGC GCGATGTCGG CATCGCGCAG
CCCGGCGCGA GATGGCGCGA GCGGGCGCGA AAGCTGTTCG CCTCCGCGCT GGAAACGCCG
GGCGGCCTGA AAGTGCAGAC CATCCACGCG CTCTGCACGC GGCTATTGCA GCAGTTTCCG
TTCGAGGCCG AAGTGCCGGC GCGTTTCACC GTGCTCGACG AGCGCGACCA GACCGAAATG
ATGGAGCGCG CCAGCCTTAA GGTCATGCTC GACGCCTCGC AAGATCCGGA CAGCCCGTCC
GGCCTCGCGC TGCGATACGC CATGAGCGCG GCCACCGATT CAACGCTGCG CGACGTCCTC
AATCAGGCCT GCCTGAGCCG GGATCATGCC CTGACCCAGA CGGACGACCG CGGCATCGCG
CAGGCGATCC GGGACGCCGC CGATGCGCTC GGTGTGGACC CAGCCGAGCG CGTCGAGGAC
GTCGAACGCG AGATCGTCGA CGGGCCGAAC CTGCCGCGAA GCAAGTGGCT CGATACGGCG
GCGCTGATCG CAACAGGCAG CTCGAACGAC GTCAAACAGG CCGAACGGCT GCGTGCCGCC
CATGCGGAAG CGGGCGACGC CGCGCGGGCC GATCGCTATC TCGACGTCTT CCTGACGGGT
GATGGCAGCC CGCGCAAATC CTTCGTCACC AGGAAGATCA GCGATGCCCG GCCTGATGTC
GCTGAAATGC TTGCCGATGA ATGCCAGCGC GTGATCGCGC TGCTCGGACG CCGCCGCGCG
ATCAACATCC GCGACCGCAC GCAATCCCTG CTCGTCATCG CCGCCGCGGT CGCCGCCCAC
TACCGGCGCG AGAAACACGA GCGCGGCCTG CTCGACTATG ACGACCTGAT CGACAAGACG
CTTCGGATGC TGGAGCAGAC CTCGCCCGGC TGGGTTCACT ACAAGCTCGA TCGCGGCGTC
GATCACGTGC TGATCGACGA GGCGCAGGAT ACCAGCCCGA AGCAGTGGGA CATCGTCGAG
CGCATCATCG CGGACTTCAC CACCGGCGAA GGCGCGCGCG AGGGCGTGCG CCGGACCGTG
TTCGCGGTCG GCGACGAGAA GCAGTCGATC TTCTCGTTCC AGGGCGCGGC GCCGCGCGAG
TTCGACGAAA GGCGGCGCAA GCTGGAGAGG AAGTTCACCG ATGCAAAGCT TCCGTTCCGC
AAGGAGGATT TCATCTACTC GTTCCGGTCC GGCAAAACGA TCCTCGAATC GGTCGACCAT
GTGTTCCGCG ATCCCGCGAT CTACGCCAGC ATCCACGCGG TCGGCGCCCA CCCCGTGCAT
GAATCGCTGG CGGACGCCGC ACCCGGCATC GTCGATCTCT GGAGCCTTGA GGAGCGGGAC
AAGCGCGAGG AGATGGAGGG CTGGCGCGCA CCGTTCGATG CGGTCACCGC AACCAGCCCC
GAGGTCAAGC TCGCACGACG CATCCGCGAC GAGATCAAGT CGCTGATCGC GCAAGGCGCC
ATGACCGGAC ACCTCGGCAA CCGCCGTCCG CTCGGTTATG GCGACATCCT GGTGCTGGTG
CGGCGGCGGG GCAACGCGTT CGACGCCGTC ATCCAGGCGC TGAAGCAGTC CGGCATTCCG
GTGGCCGGCG CGGATCGTCT TAAACTCACC GAGCACATCG CGATCATCGA CCTGATGAAC
CTTGCGGATG CGCTGCTGCT GCCAAGGGAC GATCTGGCGC TGGCGGTGGC GCTGAAAAGC
CCGCTGTTCG GCCTCGACGA CGACGACCTG TTCAAACTGG CGTGGCAGCG CAAGGGCACG
CTGCGCGACG CGCTCGCCGG GCACGCGACA GCCGATGACA AATTCCGCGA CGCCTTCGAA
AGCCTGAAGC GGTGCGAAAG TCGCGCCGCG CGCGATACGC CGTTCGCGTT CTTTGCATGG
CTTCTGGGCG AGGAAGCCGG ACGGCGGCGG ATCCTGCGCC GGCTCGGCCA TGAAGCCAAT
GATGCGCTCG ATGAGTTCCT CGAACTGGCG CTGACCTGTG AGCGCAAGGC CCCCGCGTCG
CTGCAAGGCT TCATGGCGTG GCTGCGCGCC GCCGATACCG AGGTGAAGCG CGACATGGAA
ATCTCGCGCG ACGAAGTCCG CGTGATGACC GTGCACGGCG CGAAGGGACT GGAGGCCTCG
GTGGTGTTTC TCGCCGACAC CTCGACGTCG CCGGCCGACA CCGAACGTCT GAGCCTGATC
CGCATGGGGC GCGGCAACGC ACCCGCCGGC GTCGCCGGGG TGACGATCTG GGCAGGCAGG
AAGGCCGAGG ACCCGCCCTG CGTGGCGCAG GCCCGCGCGG CCATGACCGC GGAAACCGAA
CATGAGTATC GCCGCCTGCT TTACGTCGCG ATGACGCGCG CGGCGGACCG CCTGATCGTC
GGCGGCTGCA AACCGGCCAA CCGCAAGGAT GTCCGGGAGT TCTCCTGGTA CCACCTGATC
GAAAAAGGTC TGGCCAATTC CGGCCTTGCG ATGCAGGAGA TCGAAACCGC AAGCGGCAAG
GTCAAGCGTT TCACCCGGCC AGATCACGAT GATCCTGGAT CGAATCGATC CAGGATCATG
AACGTGATCG ATTCTAATAT TTTAGAGCGG GATGCGGGCG GAAAACCGCT GCACACTTTT
CCTCATCCCG CTCTAGAGGA AGCCGAACCG GATGCCGCGG GCCCGGCACC GCCGGCGTCC
CCCGGCGCTA CCCGGATCCC GTTGCCGCCG TGGCTGCATC TCGCAGCCGC GCCGGAAGCA
CCCGCGCGCC GATCGCTGTA TCCATCGGAT GCCGACGAGG CCGCGCATCA ACGCGCGCCG
GCCGGCGCCA TCCCGGATCA GCGCCACCGC GCGCGACTGC GCGGCACGCT GGTCCATCGC
CTGCTGCAAT CCCTGCCCGA GGTGCCGCGG GACCGCCGCC GCGAGGCGGC GCTGTCCTAT
CTCGGGCGCA ACGCGAGCGG CTGGGGCAAG ACCGAGCACG ACGCGCTCGC GGCGCGGGTC
GTGGCGGTGC TCGATGATGC GAGGTTCGCC CCCGTTTTCG CGGAGGGCAG CCGGGCCGAG
GTCGCGATCG TCGGGCGGCT GACGACGCGG CGGGGCGATC CCCTGCCGGT CTCGGGCCAG
ATCGACCGGC TCGTGGTCAC TCCGCACGGG GTTCTGGTCG TCGACTACAA GACCAGCCCC
GCACCCGCGA GCCTGGCCGA CGTTCCGCCC GCCTATATCC GCCAGCTCGC GCTCTATCGC
GCGATGCTCG CGGGCCTGTA CCCGGAACTG CCCGTCAACG CGGCGCTGCT CTGGACCGAG
ACGCCTGAAA TGATGGAGAT TTCCGCCTCG ACGCTGGATG CCGCCCTGGA AGCCATCATC
TCGGTGTGA
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| Protein sequence | MVKAPRPVHP DASARQQRAS DPATSVFVSA NAGSGKTHVL VQRVIRLLLN DVDPARILCI
TFTKAAAANM AERVFSTLGH WVTLDDEALN GALRDVGIAQ PGARWRERAR KLFASALETP
GGLKVQTIHA LCTRLLQQFP FEAEVPARFT VLDERDQTEM MERASLKVML DASQDPDSPS
GLALRYAMSA ATDSTLRDVL NQACLSRDHA LTQTDDRGIA QAIRDAADAL GVDPAERVED
VEREIVDGPN LPRSKWLDTA ALIATGSSND VKQAERLRAA HAEAGDAARA DRYLDVFLTG
DGSPRKSFVT RKISDARPDV AEMLADECQR VIALLGRRRA INIRDRTQSL LVIAAAVAAH
YRREKHERGL LDYDDLIDKT LRMLEQTSPG WVHYKLDRGV DHVLIDEAQD TSPKQWDIVE
RIIADFTTGE GAREGVRRTV FAVGDEKQSI FSFQGAAPRE FDERRRKLER KFTDAKLPFR
KEDFIYSFRS GKTILESVDH VFRDPAIYAS IHAVGAHPVH ESLADAAPGI VDLWSLEERD
KREEMEGWRA PFDAVTATSP EVKLARRIRD EIKSLIAQGA MTGHLGNRRP LGYGDILVLV
RRRGNAFDAV IQALKQSGIP VAGADRLKLT EHIAIIDLMN LADALLLPRD DLALAVALKS
PLFGLDDDDL FKLAWQRKGT LRDALAGHAT ADDKFRDAFE SLKRCESRAA RDTPFAFFAW
LLGEEAGRRR ILRRLGHEAN DALDEFLELA LTCERKAPAS LQGFMAWLRA ADTEVKRDME
ISRDEVRVMT VHGAKGLEAS VVFLADTSTS PADTERLSLI RMGRGNAPAG VAGVTIWAGR
KAEDPPCVAQ ARAAMTAETE HEYRRLLYVA MTRAADRLIV GGCKPANRKD VREFSWYHLI
EKGLANSGLA MQEIETASGK VKRFTRPDHD DPGSNRSRIM NVIDSNILER DAGGKPLHTF
PHPALEEAEP DAAGPAPPAS PGATRIPLPP WLHLAAAPEA PARRSLYPSD ADEAAHQRAP
AGAIPDQRHR ARLRGTLVHR LLQSLPEVPR DRRREAALSY LGRNASGWGK TEHDALAARV
VAVLDDARFA PVFAEGSRAE VAIVGRLTTR RGDPLPVSGQ IDRLVVTPHG VLVVDYKTSP
APASLADVPP AYIRQLALYR AMLAGLYPEL PVNAALLWTE TPEMMEISAS TLDAALEAII
SV
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