Gene Nwi_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0048 
Symbol 
ID3676487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp55254 
End bp55979 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content68% 
IMG OID637711583 
Productnucleotidyl transferase 
Protein accessionYP_316668 
Protein GI75674247 
COG category[M] Cell wall/membrane/envelope biogenesis
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.413317 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.396027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACCA CTCCCACCAA AGCCATGGTG CTCGCCGCGG GCCTCGGCCT GCGCATGCGG 
CCGCTGACCG AACGGATGCC CAAGCCCATG GTGCCCGTGG CCGGCAAGCC GCTGCTCGAT
CACGTGCTGG ACAGGCTGGC GGACGCGGGC GTCAGCGAGG CTGTCGTCAA CGTGCGCTAT
CTGCCCGACC AGATCATCGA TCACGTCGCT CACCGCGACC GGCCGAAGAT CATCATCTCC
GACGAGCGCG ACCAGGTGCT TGGCACCGGC GGTGCGGTGG TGAAGGCCCT GCCGCTGCTC
GGCGACGCAC CGTTCTTCCA TCTCAATGCC GACACGATAT GGATCGACGG CGCGCGTCCC
AACCTGACGC GGCTGACCGA GGCCTTCGAT CCCGCGAGCA TGGACATTCT GCTGCTGATG
GCGCCGACCG CGAGCAGCAT CGGCTACAGC GGCAGCGGCG ACTACGCCAT GCTCCCCAAC
GGAGCGCTTC GCAGGCGACA AGAGAACCAG ATCGTGCCGT TCGTCTATGC GGGAGCCGCC
ATCCTGTCGC CCGCGCTGTT CGACGGCGCG CCGGCAGGCG AGTTTCCGCT GACCGCGATA
TTCGACCGGG CGGGTGAACG GGACCGGCTG TTCGGCCTGC GGCTCGACGG CGTCTGGATG
CATGTCGGAA CACCCGATGC GGTCCAGGCC GCGGAGAAAG CCGTGCTCGC GAGCCTCGAC
GCCTGA
 
Protein sequence
MPTTPTKAMV LAAGLGLRMR PLTERMPKPM VPVAGKPLLD HVLDRLADAG VSEAVVNVRY 
LPDQIIDHVA HRDRPKIIIS DERDQVLGTG GAVVKALPLL GDAPFFHLNA DTIWIDGARP
NLTRLTEAFD PASMDILLLM APTASSIGYS GSGDYAMLPN GALRRRQENQ IVPFVYAGAA
ILSPALFDGA PAGEFPLTAI FDRAGERDRL FGLRLDGVWM HVGTPDAVQA AEKAVLASLD
A