| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_0026 |
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| Symbol | truB |
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| ID | 3675149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 28031 |
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| End bp | 29107 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637711561 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_316646 |
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| Protein GI | 75674225 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.148493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACGC CTGACGCCGC CATCGACTCC AAAATCAGCG ATTCGAACGG CGCCGACAAA
AATAAATCCG CGGCCGACGA TAACGCCTTC AACGCGCCGG GCCGGAAAAG ACACCACAAC
AACCAGCCGC GCCGCGACAA GCGTGACGTC CATGGCTGGG TTGCGCTCGA CAAGCCGGTC
GGCATGACCT CGACCCAGGC GGTCGCGGTG GTGAAGCGGC TGTTCTCCGC CAAGCGCGCC
GGCCACGCCG GGACGCTCGA TCCGCTCGCC TCCGGCGGCC TTCCGATCGC GCTCGGCGAG
GCCACCAAGA CGGTGCCGTT CGTGATGGAC GGCCGCAAGC GTTACCGCTT CACGGTGGCC
TGGGGCGAGG AACGCGACAC CGACGACACC GAGGGCCGCG CGGTGGCGAC CAGCGCCGAG
CGCCCCACGG CGGAGGCGAT CATGGCGCTG CTGCCGAGCT TCACCGGCAA GATCGAGCAA
ATCCCGCCGC AATATTCGGC AGTGAAGATC CAGGGTGAGC GCGCCTACGA TCTGGCGCGC
GACGGCGAGG TCGTGCCGCT GGCGCCCCGC CCGGTCGAGA TACACCATTT AAATCTTGCC
GATCATCAGG ATAGCGGACA TTCGGTGTTC GAGGCCGAAT GCGGCAAGGG AACCTATGTC
CGAGCGCTCG CCCGCGACAT GGGGCGGCTG CTGGGCTGCT ACGGCCATAT CTGCGCGCTG
CGCCGGACGC TGGTCGGCCC GTTCGACGAG ACGAGCATGA TTCCGCTGGA ACATCTGCAG
GCTTTGTGCG ATAGAGCCGC GTCTGGCGAG GGAAACCTCG CCGACGCGCT TTTGCCCGTT
GAGACCGCGC TGGACGACAT CCCGGCACTG GCCGTCACAC GGGCGGATGC GGCAAGGCTC
CATCGGGGCC AAGCCGTTTT GTTGCGCGGA CGGGATGCGC CCAATATGAG CGGCACGGTT
TATGTCACGG TGGCGGGCCG GCTTCTGGCC CTTGCCGAGC TTGGCAATGG CGAACTCATC
CCCAAGCGCG TGTTCAACCT CTCCGGACTG ACCGCCAGTC CCCATCGCCA AGGATAG
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| Protein sequence | MTTPDAAIDS KISDSNGADK NKSAADDNAF NAPGRKRHHN NQPRRDKRDV HGWVALDKPV
GMTSTQAVAV VKRLFSAKRA GHAGTLDPLA SGGLPIALGE ATKTVPFVMD GRKRYRFTVA
WGEERDTDDT EGRAVATSAE RPTAEAIMAL LPSFTGKIEQ IPPQYSAVKI QGERAYDLAR
DGEVVPLAPR PVEIHHLNLA DHQDSGHSVF EAECGKGTYV RALARDMGRL LGCYGHICAL
RRTLVGPFDE TSMIPLEHLQ ALCDRAASGE GNLADALLPV ETALDDIPAL AVTRADAARL
HRGQAVLLRG RDAPNMSGTV YVTVAGRLLA LAELGNGELI PKRVFNLSGL TASPHRQG
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