Gene Nwi_0019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_0019 
Symbol 
ID3676459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp19954 
End bp20373 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content63% 
IMG OID637711554 
ProductXRE family transcriptional regulator 
Protein accessionYP_316639 
Protein GI75674218 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0558597 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCA AGGCGCCCAA TCCTGTTGAC AAGCATGTCG GCAGCCGTGT GCGCATGCGC 
CGCATCATGC TCGGTATGAG CCAGGAAAAA CTCGGGGAAG CTCTCGGTCT GACATTCCAG
CAGGTGCAGA AGTATGAGAA GGGAACCAAC CGCGTCGGCG CCAGTCGCAT CCAGCAGATC
TCCGAAATCC TTCAGGTTCC GGTCTCGTTC CTGTTCGAGG GCAGTCCCGG CACCGGCGTC
GTCAGGACCG GAGGCATGAG CGAGGCGCCC TCGCCCGCCT ATGTTTCGGA TTTCCTCGCG
ACATCCGAAG GCCTCGCGCT GACCCGCGCG TTCACCCGGA TCACGGACGC CAAGCTCCGT
CGCAGCATCG TCGACATGGT CGAACAGATC GCGGCGAGGG AGCCGTCCGA CCAGCGCTAG
 
Protein sequence
MSTKAPNPVD KHVGSRVRMR RIMLGMSQEK LGEALGLTFQ QVQKYEKGTN RVGASRIQQI 
SEILQVPVSF LFEGSPGTGV VRTGGMSEAP SPAYVSDFLA TSEGLALTRA FTRITDAKLR
RSIVDMVEQI AAREPSDQR