Gene Tbd_2800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2800 
Symbol 
ID3672951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2882820 
End bp2883356 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID637711508 
ProductF-type H+-transporting ATP synthase, delta (OSCP) subunit 
Protein accessionYP_316558 
Protein GI74318818 
COG category[C] Energy production and conversion 
COG ID[COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) 
TIGRFAM ID[TIGR01145] ATP synthase, F1 delta subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.31614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC TGTCCACCCT GGCACGCCCC TACGCCGAAG CGGTCTTCCG CATGGCGCAG 
GACGAAAACG ACCTCGCCGG CTGGTCTTCG CGCGTCACCA CGCTCGCGAC CATCGTGTCG
GACACGCAGG TCGCGCGGCT GATCGCCGAC CCGGCCGTCC CGGCGGATCG CGTGGCCGAG
CTGATCGTCA GCGTCGCGGG CGACGGTCTC GGCGAGCGCG GTGCGAATTT CGTCAAGGTG
CTCTCGGCCA ACGATCGGCT CACGCTGTTG CCCGAGATCT CGACGCAGTT CGAGACGCTC
AAGGCCGGCG CCGAAGGCAC GCTCGAAGCC ACGATCACGA GCGCGCAGGA ACTGTCGCAG
GCCCAGGTCG ACGATCTCGT CGCCGGGCTG AAGGCGAAGT TCCAGCGCGC GGTGAACGTG
CAGGTCGCGG TCGATCCCGA GCTGATCGGC GGTGCCGTGA TCATGATCGG CGATCAGGTG
ATAGACGGTT CCGTCAAGGG ACGGCTGCAG CGCATGGCGT TCGCCCTGCA AGGCTAA
 
Protein sequence
MSELSTLARP YAEAVFRMAQ DENDLAGWSS RVTTLATIVS DTQVARLIAD PAVPADRVAE 
LIVSVAGDGL GERGANFVKV LSANDRLTLL PEISTQFETL KAGAEGTLEA TITSAQELSQ
AQVDDLVAGL KAKFQRAVNV QVAVDPELIG GAVIMIGDQV IDGSVKGRLQ RMAFALQG