| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2688 |
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| Symbol | |
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| ID | 3672417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2766620 |
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| End bp | 2768938 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637711394 |
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| Product | TonB-dependent receptor protein |
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| Protein accession | YP_316446 |
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| Protein GI | 74318706 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.96874 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTCCC CCGTATTCGC CCCGCGCCTC CTGCCCTTGC TGATCATGAC GGGCTTTTCA
CCGCTGGCCG TCAGCGCGAA CGAAACGGAG CTGCCCGCCA TCGAGGTCGT CGGCAAGGAA
GATGCTGCGC CGCTCGCCAC CCGGGTCGAG AACCTGTCCA CGCTGCGGGC GACGACCAGC
GATACGGCGA GCCTGCTCAA GGACGTGCCG GGCGTCAACT TGTACGGTGG CGGCGGGGTC
TCAAGCCTGC CCGCGATCCA GGGACTGGCG GACGACCGAT TGCGCATCAA GGTCGACGGC
ATGGACCTGA TCTCGGCCTG CCCCAACCAC ATGAACCCCG CGCTCTCGTA CCTCGATCCT
TCGCAGGTCG AGTCGCTCGA GGTTTACGCC GGGATCGCCC CGGTAAGCGT GGGCGGCGAC
AGTATCGGCG GCTCGATCGT CGCCAAGACG ACCGATCCCC AGTTCGCCAA GCCGGACGAG
GGCAGCCTTG TCAAGGGCGA GGTCGGCGCG TTCTACCGCA GCAACGGCAA CGCCCGCGGT
GCAAACGCCG CGGCGACGTA CGCGACCGAG AGCTTCAACA TCTCCTACAC CGGCGCCATC
GCGCAGTCGG ACAACTACGT CGCCGGCGGC GACTTCAAGG ACAGACTCTT CGTCGCGGGA
ACGCCTCCGG GCTTCACCGG CTACCCGGGC CACACCCTGC CGGCTGACGA GGTAGGCTCG
ACCGCCTACG ACACGCGTAA CCACACGCTG GGGCTGGCGT TCCGTGGTGG CGCGCATCTG
TTCGAGGCTA AATTCGGCCT GCAGGACTTG CCCGAACAGC TTTGGCCGAA CCAGCGCATG
GACATGCTCG GCAACGACCA GAAGCGCGTG AACCTGCGCT ACCTCGGTGA CCTCGCCTGG
GGCAAGCTGG AGGCGCGGGT CTACCACGAG GACGTCGATC ACTTCATGGA CTTCGGCGCC
GACAAGAAGT ATTGGTATCA AAACCCGCCC GGCGCGACCT ACGACGGCAC GCCTTGCACA
GTGACGTTGC CCGTCTCTGC GTGTGCCGCA GGCATGCCGA TGTACACGGC GAGTACGAAT
ACCGGTGCTG TCGTCAAGGC CGACATTGCC CTGACGCAGC AGGATCTGCT GCGTGTCGGC
ACCGAGTTCC AGCGCTACCG CCTCGACGAC TGGTGGCCGG CCTCCGGCGC GAGCATGGCG
CCCTACACCT TCTGGAACGT CAACGAGGGC GAGCGCGATC GCGCGGCTGT CTTCGCCGAA
TGGGAAAAGC AGTTCGATTC ACAGTGGATG ACGCTCGCCG GCGTGCGCTT CGAGCGGGTG
AGCATGGACA CCGGCGACGT GCACGGCTAC AACACGGACA TCTACCCGAC CGTCGCCGCA
GCAAGCGGCG GCAACCAGAC CCGCGACGCC GCCAACTTCA ACAATGCCGA CCACGGCAAG
ACCGACAACA ACTGGGACAT GACCCTGCTT GCGCGCTACA CACCCAGCGC CACGCGTGAC
ATCGAGTTCG GCTTTGCGCA CAAGACGCGC TCGCCCAATC TGCACGAGCG CTACACCTGG
TCGACGTGGC AGATGGCGGC GCTGATGGTC AACTGGTTCG GCGACGGCAA CGGCTACATC
GGCAACCTCG ACCTCGAACC CGAGCAGGCC AACACGGTGT CCGCCACCTT CGACTGGCAC
GCGGCCGATC GCAACTGGGA GTTCAAGGCG ACCCCCTACT ACACCTACGT CACCGACTAC
ATCGACGCGG TCCAGTGGAA CGCGACGGCG AACGCACCGA GCACGACGCT CGTGACCGAC
CAGTACACGG TGCTCAAGTT CGTCAACCAG TCAGCGCAGC TCTACGGCAT CGACCTGTCG
GGAAGGATGC CGCTGGCGAA GACCGGCTGG GGCGAGTTCG GCCTCAAGGG GCTGGTCAAC
TACACCCGGG GTGAGAACCG CGACACCGGC GACAATCTGT ACAACATCAT GCCGCTCAAC
GGCAAGCTCG CCCTGACGCA GAAGCTGCGC GGCTGGGACA ACACCGTCGA AGTGGTGATG
GTGAGCCGGA AGGAGGACGT GTCCGCGATG CGCAATGAGA TTGAAACGCC CGGCTACGCG
CTCCTGAATC TGCGCGGCAG CCATTCGTGG AAGCAGGTGC GCCTCGATTT CGGCGTGGAG
AACGTGTTCG ACCGGCTCTA CTACCATCCC CTCGGCGGCG CCTATCTGGG GCAGGGTACG
ACAATGACCG CGAATGCTGT CCAGACGGTG CCGCAGTGGG GAACCCCCGT TCCCGGCATG
GGCCGCTCGG TCTACACTGC GCTGAATTAT CAATTTTGA
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| Protein sequence | MHSPVFAPRL LPLLIMTGFS PLAVSANETE LPAIEVVGKE DAAPLATRVE NLSTLRATTS
DTASLLKDVP GVNLYGGGGV SSLPAIQGLA DDRLRIKVDG MDLISACPNH MNPALSYLDP
SQVESLEVYA GIAPVSVGGD SIGGSIVAKT TDPQFAKPDE GSLVKGEVGA FYRSNGNARG
ANAAATYATE SFNISYTGAI AQSDNYVAGG DFKDRLFVAG TPPGFTGYPG HTLPADEVGS
TAYDTRNHTL GLAFRGGAHL FEAKFGLQDL PEQLWPNQRM DMLGNDQKRV NLRYLGDLAW
GKLEARVYHE DVDHFMDFGA DKKYWYQNPP GATYDGTPCT VTLPVSACAA GMPMYTASTN
TGAVVKADIA LTQQDLLRVG TEFQRYRLDD WWPASGASMA PYTFWNVNEG ERDRAAVFAE
WEKQFDSQWM TLAGVRFERV SMDTGDVHGY NTDIYPTVAA ASGGNQTRDA ANFNNADHGK
TDNNWDMTLL ARYTPSATRD IEFGFAHKTR SPNLHERYTW STWQMAALMV NWFGDGNGYI
GNLDLEPEQA NTVSATFDWH AADRNWEFKA TPYYTYVTDY IDAVQWNATA NAPSTTLVTD
QYTVLKFVNQ SAQLYGIDLS GRMPLAKTGW GEFGLKGLVN YTRGENRDTG DNLYNIMPLN
GKLALTQKLR GWDNTVEVVM VSRKEDVSAM RNEIETPGYA LLNLRGSHSW KQVRLDFGVE
NVFDRLYYHP LGGAYLGQGT TMTANAVQTV PQWGTPVPGM GRSVYTALNY QF
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