Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2668 |
Symbol | |
ID | 3672397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2740951 |
End bp | 2742948 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637711374 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_316426 |
Protein GI | 74318686 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase [COG0628] Predicted permease |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACGA TCCGCCCGCT CAACATTCCC TGGCTGGCCC TCGGCGCAAC GCTGCTCGTC GCCGGCCTGC TGATCTATCT GCTCGGGCCG ATTCTGACGC CTTTCCTCGC GGGCGCCCTG CTCGCCTACA TCTTCGACCC GCTCGTCGAC CGGCTCGAGG CACGCCGCAT CCCGCGCGCC GCCGGCACGG CCATCGTCAT CGTGCTCGCG GGACTCATCC TGTTCGGCCT CCTGCTCGTC GCGCTGCCGC TCTTCCAGGG GCAGTTCGCC GAATTGAGCC AGCGCGTCCC CGCAGGGCTG GACCTGCTGC AGACGCGCTT CCTGCCCTGG GTCGAGCGGA CTTTCGGGAT CGCGGTCAGC CCCCATCTCG ACGGACTCAA GGCCTGGCTC ACCGAGAAGG CGACGCAGCA GGGGGCGAAC TGGCTGCCGC GGCTGCAGAC CGGCGCGCTC GCGATCATCG GCGCGCTGGT CAACCTGCTG CTCATTCCCG TCGTCATGTT TTATCTGCTG AAGGACTGGG ACGTCATCGT CGGACGCGTC GCCGCGCTCG CGCCGCGTCC CTGGCTGCCG GCGGCGCGGC GCATCGGCAG CGCGATGAAC GCGGTGGTCG GAGAATTCCT GCGCGGCCAG CTCGCGGTCA TGATCACGCT CTCGGTCTAT TACAGCGTGG CGCTGTGGGC GGTCGGGCTC GATTACGCGC TGCCGATCGG CGTTCTGACC GGCGTGCTGT CCTTCGTGCC CTTCCTCGGC TTCGGCCTCG GCATGGTCCT CGCGCTGCTG GTCGCGCTGC TGCAGTACCC GGACTGGGTC GGCGTCGCCT GGGTCGCCGG GGTCTATCTC GCCGGGCAGG CGCTCGAAAG CTACGTCGTC ACCCCGCGCC TGGTCGGCGA GCGCGTCGGC CTGCATCCGG TCGCGGTGAT CTTTGCGCTC GCAGCCTTCG GCCAGTTGTT CGGCTTCGTC GGCGTCCTGC TCGCGGTGCC GCTCGCCGCG ACCCTGCTCG TCGGATTGCG CGAATTGCGC GCCGTCTACC AGGCCAGTAG CTTCTACCGC GGCGGCTATA ATCCCGGCTT TTCCGGTTCC GCCATGCCCG CCATGTCCGC CCCCCTCTCC GGCCAGCCCC TGTTCGAATC GCATATCGCC TCGCTGCCGC TCATCCACCG CGGCAAGGTG CGCGACATCT ACGCGGTGGG CGACGACAAG CTGCTGATCG TCACGACCGA CCGCCTGTCG GCGTTCGACG TCGTCATGCC GACGCCGATC CCGGGCAAGG GTGAGGTGCT GACGCGGGTC TCGGCGTTCT GGTTCGACAA GCTGCGGGCC GTCGTTCCGA ACCAGACGCT CGCGATTGCG CCGGAAGCCG TGGTCGCGGA AGACGAAAAA GACCAGGTCG CGGGGCGCGC GATCGTGGTG CAAAAGCTCA AGGCGCTGCC GATCGAGGCG ATCGTGCGCG GCTACCTCGT GGGTTCAGGA TGGAAGGAAT ACCAGCGGAG CCAGTCGGTC TGCGGCATCG CGCTGCCCGC CGGCCTCATG CAGGCCGACC GCCTGCCCGA GCCGATCTTC ACGCCGTCGA CCAAGGCGGC GCTCGGCGCG CACGACGAAA ACATCGCGTT CGAACAGATG GCCGAGCGCA TCGGCGCCGA GCTCGCCGCC CAGGTGCGCG ACGTCAGCCT TGCGCTCTAC CAGGCGGCCG CCGAGTACGC GCGCACGCGC GGCATCATCA TCGCCGACAC CAAATTCGAA TTCGGCCTCG ACGCGGCAGG CCAGCTGATG TGGATCGACG AGGCACTGAC CCCGGATTCG TCGCGCTTCT GGCCCGCCGA CCAGTACCGT CCGGGCAGCA ATCCCCCGAG CTTCGACAAA CAGTTCGTGC GCGACTGGCT CGAAGCGAGC GGATGGAACA AGCAAGCCCC GGGGCCGGCG CTGCCGGCCG ACATCGTCGC GCGGACGAGC GAGAAATACC GCGAGGCGAT GGTCCGCCTG CTCGGCGACG CTATTTGA
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Protein sequence | MNTIRPLNIP WLALGATLLV AGLLIYLLGP ILTPFLAGAL LAYIFDPLVD RLEARRIPRA AGTAIVIVLA GLILFGLLLV ALPLFQGQFA ELSQRVPAGL DLLQTRFLPW VERTFGIAVS PHLDGLKAWL TEKATQQGAN WLPRLQTGAL AIIGALVNLL LIPVVMFYLL KDWDVIVGRV AALAPRPWLP AARRIGSAMN AVVGEFLRGQ LAVMITLSVY YSVALWAVGL DYALPIGVLT GVLSFVPFLG FGLGMVLALL VALLQYPDWV GVAWVAGVYL AGQALESYVV TPRLVGERVG LHPVAVIFAL AAFGQLFGFV GVLLAVPLAA TLLVGLRELR AVYQASSFYR GGYNPGFSGS AMPAMSAPLS GQPLFESHIA SLPLIHRGKV RDIYAVGDDK LLIVTTDRLS AFDVVMPTPI PGKGEVLTRV SAFWFDKLRA VVPNQTLAIA PEAVVAEDEK DQVAGRAIVV QKLKALPIEA IVRGYLVGSG WKEYQRSQSV CGIALPAGLM QADRLPEPIF TPSTKAALGA HDENIAFEQM AERIGAELAA QVRDVSLALY QAAAEYARTR GIIIADTKFE FGLDAAGQLM WIDEALTPDS SRFWPADQYR PGSNPPSFDK QFVRDWLEAS GWNKQAPGPA LPADIVARTS EKYREAMVRL LGDAI
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