Gene Tbd_2668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2668 
Symbol 
ID3672397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2740951 
End bp2742948 
Gene Length1998 bp 
Protein Length665 aa 
Translation table11 
GC content68% 
IMG OID637711374 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_316426 
Protein GI74318686 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
[COG0628] Predicted permease 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA TCCGCCCGCT CAACATTCCC TGGCTGGCCC TCGGCGCAAC GCTGCTCGTC 
GCCGGCCTGC TGATCTATCT GCTCGGGCCG ATTCTGACGC CTTTCCTCGC GGGCGCCCTG
CTCGCCTACA TCTTCGACCC GCTCGTCGAC CGGCTCGAGG CACGCCGCAT CCCGCGCGCC
GCCGGCACGG CCATCGTCAT CGTGCTCGCG GGACTCATCC TGTTCGGCCT CCTGCTCGTC
GCGCTGCCGC TCTTCCAGGG GCAGTTCGCC GAATTGAGCC AGCGCGTCCC CGCAGGGCTG
GACCTGCTGC AGACGCGCTT CCTGCCCTGG GTCGAGCGGA CTTTCGGGAT CGCGGTCAGC
CCCCATCTCG ACGGACTCAA GGCCTGGCTC ACCGAGAAGG CGACGCAGCA GGGGGCGAAC
TGGCTGCCGC GGCTGCAGAC CGGCGCGCTC GCGATCATCG GCGCGCTGGT CAACCTGCTG
CTCATTCCCG TCGTCATGTT TTATCTGCTG AAGGACTGGG ACGTCATCGT CGGACGCGTC
GCCGCGCTCG CGCCGCGTCC CTGGCTGCCG GCGGCGCGGC GCATCGGCAG CGCGATGAAC
GCGGTGGTCG GAGAATTCCT GCGCGGCCAG CTCGCGGTCA TGATCACGCT CTCGGTCTAT
TACAGCGTGG CGCTGTGGGC GGTCGGGCTC GATTACGCGC TGCCGATCGG CGTTCTGACC
GGCGTGCTGT CCTTCGTGCC CTTCCTCGGC TTCGGCCTCG GCATGGTCCT CGCGCTGCTG
GTCGCGCTGC TGCAGTACCC GGACTGGGTC GGCGTCGCCT GGGTCGCCGG GGTCTATCTC
GCCGGGCAGG CGCTCGAAAG CTACGTCGTC ACCCCGCGCC TGGTCGGCGA GCGCGTCGGC
CTGCATCCGG TCGCGGTGAT CTTTGCGCTC GCAGCCTTCG GCCAGTTGTT CGGCTTCGTC
GGCGTCCTGC TCGCGGTGCC GCTCGCCGCG ACCCTGCTCG TCGGATTGCG CGAATTGCGC
GCCGTCTACC AGGCCAGTAG CTTCTACCGC GGCGGCTATA ATCCCGGCTT TTCCGGTTCC
GCCATGCCCG CCATGTCCGC CCCCCTCTCC GGCCAGCCCC TGTTCGAATC GCATATCGCC
TCGCTGCCGC TCATCCACCG CGGCAAGGTG CGCGACATCT ACGCGGTGGG CGACGACAAG
CTGCTGATCG TCACGACCGA CCGCCTGTCG GCGTTCGACG TCGTCATGCC GACGCCGATC
CCGGGCAAGG GTGAGGTGCT GACGCGGGTC TCGGCGTTCT GGTTCGACAA GCTGCGGGCC
GTCGTTCCGA ACCAGACGCT CGCGATTGCG CCGGAAGCCG TGGTCGCGGA AGACGAAAAA
GACCAGGTCG CGGGGCGCGC GATCGTGGTG CAAAAGCTCA AGGCGCTGCC GATCGAGGCG
ATCGTGCGCG GCTACCTCGT GGGTTCAGGA TGGAAGGAAT ACCAGCGGAG CCAGTCGGTC
TGCGGCATCG CGCTGCCCGC CGGCCTCATG CAGGCCGACC GCCTGCCCGA GCCGATCTTC
ACGCCGTCGA CCAAGGCGGC GCTCGGCGCG CACGACGAAA ACATCGCGTT CGAACAGATG
GCCGAGCGCA TCGGCGCCGA GCTCGCCGCC CAGGTGCGCG ACGTCAGCCT TGCGCTCTAC
CAGGCGGCCG CCGAGTACGC GCGCACGCGC GGCATCATCA TCGCCGACAC CAAATTCGAA
TTCGGCCTCG ACGCGGCAGG CCAGCTGATG TGGATCGACG AGGCACTGAC CCCGGATTCG
TCGCGCTTCT GGCCCGCCGA CCAGTACCGT CCGGGCAGCA ATCCCCCGAG CTTCGACAAA
CAGTTCGTGC GCGACTGGCT CGAAGCGAGC GGATGGAACA AGCAAGCCCC GGGGCCGGCG
CTGCCGGCCG ACATCGTCGC GCGGACGAGC GAGAAATACC GCGAGGCGAT GGTCCGCCTG
CTCGGCGACG CTATTTGA
 
Protein sequence
MNTIRPLNIP WLALGATLLV AGLLIYLLGP ILTPFLAGAL LAYIFDPLVD RLEARRIPRA 
AGTAIVIVLA GLILFGLLLV ALPLFQGQFA ELSQRVPAGL DLLQTRFLPW VERTFGIAVS
PHLDGLKAWL TEKATQQGAN WLPRLQTGAL AIIGALVNLL LIPVVMFYLL KDWDVIVGRV
AALAPRPWLP AARRIGSAMN AVVGEFLRGQ LAVMITLSVY YSVALWAVGL DYALPIGVLT
GVLSFVPFLG FGLGMVLALL VALLQYPDWV GVAWVAGVYL AGQALESYVV TPRLVGERVG
LHPVAVIFAL AAFGQLFGFV GVLLAVPLAA TLLVGLRELR AVYQASSFYR GGYNPGFSGS
AMPAMSAPLS GQPLFESHIA SLPLIHRGKV RDIYAVGDDK LLIVTTDRLS AFDVVMPTPI
PGKGEVLTRV SAFWFDKLRA VVPNQTLAIA PEAVVAEDEK DQVAGRAIVV QKLKALPIEA
IVRGYLVGSG WKEYQRSQSV CGIALPAGLM QADRLPEPIF TPSTKAALGA HDENIAFEQM
AERIGAELAA QVRDVSLALY QAAAEYARTR GIIIADTKFE FGLDAAGQLM WIDEALTPDS
SRFWPADQYR PGSNPPSFDK QFVRDWLEAS GWNKQAPGPA LPADIVARTS EKYREAMVRL
LGDAI