| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2604 |
|---|
| Symbol | |
|---|
| ID | 3672580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2679919 |
|---|
| End bp | 2680824 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637711310 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_316362 |
|---|
| Protein GI | 74318622 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.704513 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAACT ACAAGCATCT CCATTACTTC AGGACCGTGG CCAAGGCCGG GGCGATCAAC
CGCGCGGCCG AAAAGCTGCA CCTGACGCCG CAGACGCTGT CCGGCCAGCT CAGCGCCTTC
GAGCAACGCC TCGGCGTCGC GCTGTTCCGC CGCAGCGGGC GGCGACTCGA GTTGACCGAC
GCGGGCCACA CTGCCCTGAC CTACGCCGAC GAGATCTTCC AGGTCGGCGC CGAACTCGAA
GATGCCCTGC AGAACCGCGC GGCGGCGCCG GTGCGCCCCT TCCGTGTCGG AATCGCCGAC
GTCGTCCCGA AAGCGATCGC CTATCAACTG CTCGCGCCCG CGCTGACGCT CGCCGAGCCG
GTACGCCTCG TATGCAAGGA GGACCGGCTC GAGGCGCTCG CCGCGGCGCT GTCGATCCAC
CGCCTCGACA TGGTGCTCGC GGACCGCCCG CTGCCGTCGA CGATGGACGT CAAGGGCTAC
AGCCACCCGC TCGGCGAGTG CGGCATCGCG TTTCTCGCCG CCCCCGCGGT CGCCGCAAGC
GCGGGCAGCG ACTTCCCCGC CAACCTGCAC GGCGCACCGC TTCTCGTCCC GGGCGAAGAC
AGCGCCTTGC ACGGGCCCTT GCTGCGCTGG CTCGAACGGC GCGGCCTGCA ACCCGTCGTT
GTCGGCGAGT TCGACGACAG CGCCCTCATG AGCGCATTCG GTCAGGCCGG CGCCGGCGTG
TTCCCGGTGC CGCTCAGCAC CGCCGGGGAG GTGATGCGCC AGTACGCCGT GGTCGACCTG
GGGCGGACGC TGGAGATTCG CGAGCGCTTC TTCGCGATTT CGGTCGAGCG CCGACTGAGC
CACCCGGCCG TCGTCGCCGT CAGCGAAGCG GCACACCAGC GCTTTCAGCA TGCCAACGAC
GATTAG
|
|---|
| Protein sequence | MLNYKHLHYF RTVAKAGAIN RAAEKLHLTP QTLSGQLSAF EQRLGVALFR RSGRRLELTD
AGHTALTYAD EIFQVGAELE DALQNRAAAP VRPFRVGIAD VVPKAIAYQL LAPALTLAEP
VRLVCKEDRL EALAAALSIH RLDMVLADRP LPSTMDVKGY SHPLGECGIA FLAAPAVAAS
AGSDFPANLH GAPLLVPGED SALHGPLLRW LERRGLQPVV VGEFDDSALM SAFGQAGAGV
FPVPLSTAGE VMRQYAVVDL GRTLEIRERF FAISVERRLS HPAVVAVSEA AHQRFQHAND
D
|
|---|
| |