Gene Tbd_2596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2596 
Symbol 
ID3672572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2671609 
End bp2672826 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content67% 
IMG OID637711302 
Productlong chain fatty acid transport protein 
Protein accessionYP_316354 
Protein GI74318614 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0488563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.346925 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTTT GCTTCAAGCG GCTCGCCGCA AGCCTTGCGC TTGCGGCGGC CGGCGGCGCG 
GCCCACGCGG CCGGCTACGC GCTGATCGAA CAGAACGCGA GCGGGCTCGG CAACGCCTAC
GCGGGCCAGG CGGCCGCGGC GAGCGATGCC AGCACGATCT ATTTCAACCC GGCCGGCATG
ACCCGGCTGC CCGACCGGCA GATCGTCGTC GCCGGGCATC TGATCAAGCC CCGCGCCGAG
TTCTCGGGGA CGAGCAGCGC CGGCGTCACG GGCGGGCAGG GCGGCGACGC CGGGGACTGG
GCCTTCGTCC CGAATGCCTA TGTCGCGATG CGCCTGACGC CGGACCTGCA TCTGGGCCTC
GGCCTCAACA GCCCCTTCGG CCTCAAGACC GAATACGAAC CCGAGTGGAT CGGCCGTTAT
CAGGCGATTG AGTCGGAGCT CAAGACGATC AACCTGAATC CGTCCGTCGC CTACAAGCTC
AGCGAGACGT TTTCGGTGGG CGCTGGGCTT AATATCCAGT GGATCGAAGC GACGCTGACC
CACCGACAGC CGCTTGGGCC ACCCCCTTTC CCGGCTCCGT TGCTCAAGAT CAAGGGCGAC
GATTACGGCT GGGGCTACAA CCTCGGCGCG CTCTGGCAGG CGACGCCTGC GACGCGCATC
GGCGTGTCCT ACCGTTCCGA AGTCGACTAC ACGCTCGAGG GCACGTCGAG CACTTCCGAC
CCCGTTGTGA ACCCCCTCAA TGGCCCGGTG ACCGCGGAGG TCACGCTGCC GGACAGCGCG
TCGCTGAGTC TTTTCCACAC GCTCTCCCCG CAGTGGGACC TGTTGGCCGA CGTGAGCTGG
ACGGGCTGGA GCGATTTCGA CGACCTGCCG ATCCGCGGCA CAGTCGACAG CACGACGATC
GAAAACTGGA GCGACAGCCT GCGCTATTCG CTCGGCGCAA CCTGGCACGC GAACGAAAAA
TGGAGTCTGC GCGGCGGCAT CGCCTACGAT GAAGCGCCGG TGTCGGACCG CTATCGCACC
CCGCGCATCC CGGACGGCGC GCGCACCTGG GTCGCGCTCG GCGGCCAGTA CCGCGTGTCG
AAGCGCAGCG CACTCGACTT CGGCTACGCG CACCTGTTCG TCAACGACCC GGGTCTGCAG
CCGTCGACGA CGACGCTCGA CGGCGAATAC GACAGCGCGG TCGACATCGT GTCCGCCCAG
TTCACGCTGA ATTTCTGA
 
Protein sequence
MSLCFKRLAA SLALAAAGGA AHAAGYALIE QNASGLGNAY AGQAAAASDA STIYFNPAGM 
TRLPDRQIVV AGHLIKPRAE FSGTSSAGVT GGQGGDAGDW AFVPNAYVAM RLTPDLHLGL
GLNSPFGLKT EYEPEWIGRY QAIESELKTI NLNPSVAYKL SETFSVGAGL NIQWIEATLT
HRQPLGPPPF PAPLLKIKGD DYGWGYNLGA LWQATPATRI GVSYRSEVDY TLEGTSSTSD
PVVNPLNGPV TAEVTLPDSA SLSLFHTLSP QWDLLADVSW TGWSDFDDLP IRGTVDSTTI
ENWSDSLRYS LGATWHANEK WSLRGGIAYD EAPVSDRYRT PRIPDGARTW VALGGQYRVS
KRSALDFGYA HLFVNDPGLQ PSTTTLDGEY DSAVDIVSAQ FTLNF