| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2568 |
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| Symbol | |
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| ID | 3672544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2642187 |
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| End bp | 2643107 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711274 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_316326 |
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| Protein GI | 74318586 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0824843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACCT TGACCATCGC CTCTCGTGAA AGTGCCCTCG CCATGTGGCA GGCGGAGCAC
ATTCGTGACC GCCTGCGCGA ATTGCACCCG GAGTGTAAGG TCAACATCCT TGGTATGACC
ACGCGCGGCG ATCAGATTCT CGACGTGACG CTGTCGAAAA TCGGCGGGAA GGGCCTGTTT
GTCAAGGAAC TCGAGGTCGC GCTCGCGGCG GGCGAGGCCG ACCTCGCGGT GCATTCGATG
AAGGACGTGC CGATGGAATT GCCGCCCGGT TTCGAGCTCG CCGTGATCGG CGAGCGCGAG
GACCCGCGCG ACGCCTTCGT GTCGAATCGC TACGCGCGGC TCTCGGACCT GCCGCCGGGC
AGCGTCGTCG GCACGTCGAG CCTGCGCCGC GAAGCGCAGT TGCGCGCGCG CTATCCGCAC
CTCACGGTCA AGCCGCTGCG CGGCAACGTC GGCACGCGGC TGAAAAAACT CGACGAAGGC
CAGTTCGACG CGATCCTGCT CGCTGCGGCC GGTCTCAAGC GGCTCGGGCT CGGCGCCCGC
ATCAAGAGCC TGCTGTCGGT CGAGGAGAGC ATTCCGGCCG CTGGCCAGGG CGCGCTCGGC
ATCGAAATCC GCAGCGGCAA CACGGCCGTG GCGGCGATGC TGGCGCCGTT GAACGATCCC
GTAACCGCAG CCTGCGTGCG CGCCGAGCGC CAAGTCAGCC GCGTGCTTGG CGGAAGTTGC
CAGGTGCCGC TCGGGGCGCA CGCGTCATAC AAGGACGGGC GCCTGCTGCT CGAGGGCTTC
GTCGCCAAGC CCGACGGCAG CCGCTTCCTT GTCGACCGTG CCGAGGGCGA CGCGAGCGAT
CCCGAGGCGG TCGGTCAGGC GCTGGCCGAC AAGCTGCTGG CGCAGGGTGC GCGCGCGGTC
CTCGACGCCT TGCCGGCATG A
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| Protein sequence | MHTLTIASRE SALAMWQAEH IRDRLRELHP ECKVNILGMT TRGDQILDVT LSKIGGKGLF
VKELEVALAA GEADLAVHSM KDVPMELPPG FELAVIGERE DPRDAFVSNR YARLSDLPPG
SVVGTSSLRR EAQLRARYPH LTVKPLRGNV GTRLKKLDEG QFDAILLAAA GLKRLGLGAR
IKSLLSVEES IPAAGQGALG IEIRSGNTAV AAMLAPLNDP VTAACVRAER QVSRVLGGSC
QVPLGAHASY KDGRLLLEGF VAKPDGSRFL VDRAEGDASD PEAVGQALAD KLLAQGARAV
LDALPA
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