| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2559 |
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| Symbol | |
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| ID | 3672535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2633554 |
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| End bp | 2635812 |
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| Gene Length | 2259 bp |
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| Protein Length | 752 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637711265 |
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| Product | thiol:disulfide interchange protein DsbD |
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| Protein accession | YP_316317 |
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| Protein GI | 74318577 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4232] Thiol:disulfide interchange protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.745294 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAGT GGACCCGACT GCTCGGCGCC ATTCCGCTTC TGTGGGCCGC GCTCGTGCAT
CTGCCGGGCG CGCAGGCCGA AGAATTTCTT GACCCCGAAG TCGCGTTCAA GTTCTCGGCG
CGCGCGCTCG ACGCCGACAC GCTCGAGGCG CGCTGGCAGA TCGCCGACGG CTACTACATG
TATCGCGACA AGTTCAGGTT CGAACTCGAA GGCGCGACGC TCGGCGAGGC GCGCCTGCCG
CCCGCCAAAG TCAAGGAAGA CGAGTACTTC GGCCGCGTCG AAACCTATAC CAAGGACGTA
CGCATCGCCT TGCCGATCAA AGCTGCGCCG GGGACGAAAA CGGTCACCCT GAAGACCGTC
TCGCAAGGCT GCGCCGACGC GGGACTCTGT TACACGCCGC AGACCGTCAG CGCGAAGGTT
GAACTGCCGG CGCCGCCCGT CGCCGCACCG GCGAGCCTCG CGCCAGTCGC GACCGCGCAG
GCCGCGAGCG GCGGCCTGGG CAGCCTGATG GGCGACGGCG GCGCGCCGCA ATTGCTTCCG
CCCGACGAGG CCTTCCTCGT CAAGGCGACG ATGCCGACGG CGACGACGGT CAGATTCGAC
TACACGCTGA CCGCCGACAC CTATCTGTAT CGCGACAAGT TCGTATACAC GGTGAAGGCA
CCGGCCGGCG TGTCGGTGAG CAAGAACGAA CTGCCGCCGG GCGAGGTCAA GGACGACCCC
ACCTTCGGTC GCACCGAGGT CTATCACCGC GACCTCTCCG CGAACCTGAC GCTTTCGCGT
GCGCTCGCCG CAGGCGAAAC CCTCGTCGTC GAGGCGGGCT GGCAGGGCTG CAACGAAAAG
GTCGGCGTCT GCTATCCGCC GATCAAGCGC GAGTTCTCGC TGTCCGCGTC CGGCGGCAAG
GCCGACGCTG CACCGAGCGG AACTGGCGCC GGGGAATCGG ACACCTCGCG CATCGAGCGC
GTGCTCAAGA GCGGCAGTTC CTGGGCCGTC GTCGCGACGT TTTTCGGTTT CGGCCTGTTG
CTCGCCTTCA CCCCCTGCGT GTTTCCGATG ATTCCGATCC TGTCCGGCAT CATCGCCGGG
CAGAAGAAGA CGCTCACCAA GGCGAACGGC TTCCTGCTCT CGCTCGCCTA CGTGCTCGGC
ATGGCGATCA CCTACGCACT CGCCGGCGTC GCCGCGGCGC TGTCGGGCAC GCTGCTGTCG
AACGCGCTGC AGAACCCCTG GGCGCTCGGC ATCGGCGCCG GCATTTTCGT GCTGCTCGCG
CTGTCGATGT TCGGCTTCTT CGAGATCCAG TTGCCGAGCG CGTTGCAGAG CAAGTTTTCC
GACGCGTCCA ATCGCATGAA GGGCGGCAAC TTCCTCGGCG TCTTCGTCAT GGGCGCGCTG
TCCGCGGTCA TCGTCGGGCC GTGCGTCGCG CCGCCGCTCG CGGCCGCGCT CGCCTTCATC
GCGCAGACCG GCAACACGAC GCTCGGCGGC GTCGCGCTCT TCGTGCTGGC GCTCGGCATG
GGCGTGCCCT TGCTGCTGGT CGGCGTGTCG GCCGGCGCAC TGTTGCCGCG CGCCGGTGGC
TGGATGAACG CGGTGAAGTA TTTCTTCGGC GTGCTCATGC TCGCGATCGC TATCTACCTC
ATCTCGCCGA TCATCCCGTC CTGGATCCAC ATGCTCCTGT GGGCGCTGCT GCTGATCGCC
GCGGCGATCT ATCTGCATGC GCTCGATCCG CTGCCGCAGC ACGCGAGCGG CTGGTCCCGG
CTGTGGAAGG GACTCGGCGT CGTGCTGCTG ATCGGCGGCC TAGCCATGCT GCTCGGCATG
CTCGCGGGCA GCCGCGACGT GCTGCAGCCG CTCGACGTCT TCAAGCGCGG CGCGCCCGGC
GCGGGCGGAA GCGCGGCCGC CGCCGTTCCG GCCGGACTGC GCTTCGAGAA GGTGAAGGAC
GTCGCCGAAC TCGATGCGCG GCTCGCCGCG GCAAAGGCCG AGGGGCGCCC GGTGATGCTC
GATTTCTATG CGGACTGGTG CGTGTCGTGC AAGGAGATGG AGCGCTTCAC GTTCAGCGAT
CCCAAGGTCC AGGCGCGTCT GGCGGACGTG GTGCTGCTCA AGGCCGACGT CACCGCCAAC
AACGCGGCCG ACAAGGCGCT GCTCAAGCGC TTCGGCCTGT TCGGCCCGCC GGGCCTGATT
TTCTGGAACA GCGCCGGCGT CCAGTCGGAC TACAAGGTGA TCGGCTTCGA GAAGGCCGAG
AAATTCCTCG CCAGCGTCGA CGCCGCGCTC GGGACCTGA
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| Protein sequence | MIKWTRLLGA IPLLWAALVH LPGAQAEEFL DPEVAFKFSA RALDADTLEA RWQIADGYYM
YRDKFRFELE GATLGEARLP PAKVKEDEYF GRVETYTKDV RIALPIKAAP GTKTVTLKTV
SQGCADAGLC YTPQTVSAKV ELPAPPVAAP ASLAPVATAQ AASGGLGSLM GDGGAPQLLP
PDEAFLVKAT MPTATTVRFD YTLTADTYLY RDKFVYTVKA PAGVSVSKNE LPPGEVKDDP
TFGRTEVYHR DLSANLTLSR ALAAGETLVV EAGWQGCNEK VGVCYPPIKR EFSLSASGGK
ADAAPSGTGA GESDTSRIER VLKSGSSWAV VATFFGFGLL LAFTPCVFPM IPILSGIIAG
QKKTLTKANG FLLSLAYVLG MAITYALAGV AAALSGTLLS NALQNPWALG IGAGIFVLLA
LSMFGFFEIQ LPSALQSKFS DASNRMKGGN FLGVFVMGAL SAVIVGPCVA PPLAAALAFI
AQTGNTTLGG VALFVLALGM GVPLLLVGVS AGALLPRAGG WMNAVKYFFG VLMLAIAIYL
ISPIIPSWIH MLLWALLLIA AAIYLHALDP LPQHASGWSR LWKGLGVVLL IGGLAMLLGM
LAGSRDVLQP LDVFKRGAPG AGGSAAAAVP AGLRFEKVKD VAELDARLAA AKAEGRPVML
DFYADWCVSC KEMERFTFSD PKVQARLADV VLLKADVTAN NAADKALLKR FGLFGPPGLI
FWNSAGVQSD YKVIGFEKAE KFLASVDAAL GT
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