Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2548 |
Symbol | |
ID | 3672524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2618827 |
End bp | 2624709 |
Gene Length | 5883 bp |
Protein Length | 1960 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637711254 |
Product | CheA Signal transduction histidine Kinases (STHK) |
Protein accession | YP_316306 |
Protein GI | 74318566 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.798517 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCCT TACTCGATTA CGACACCGGT CCCCTGAATT GGGTGCGCGC GGACATCGAC GCAGCCCTCC AGGCCGCGCT CGGGCGTATC CAGGCCTACA GCGCCGACGG CGATCTCACC AATGCCATGC GCCTGGCGCG CGACGACGCC CATCAGGTCG CCGGCGCGCT ACGCATGGTC GGCCTCGAAG GCGCTGCGAC GCTCGCCGAT GCGCTGAAGT CGCTGCTCGG CGACCTCGAC GAAAGTCGGG CACAGCCGAA CGACGCGCTC GTGCGGGCGT TGCGCAACGC CATCGAGGGC CTGCAGCGCT GGGTGCGGGA TCTCGCGGAC GGCCGCGGCA CCGGCGAACT CGCGCTGTTT CCGCTGTACA AGCGTTTGCG CGAACTGCAG GGCGCCGAGC GCGTGTTCGA AGGCGAGTTG TTCTTCCCCG ACATGCGCAG CCGGGTGTCG CCCGGCCCCG CCGTGGCACT GGCGCCCGAA GCGCTCGCGG CCGAGGTCAA GTCCGCGCGT GCGACGTTCC AGCGCGGGCT GCTGGCCTTT CTGCGCAACG TCGACGCCGA GCAGGGTCTG CGCCGCATGC GCGACGCGCT TGCGGCGATC GAGCAGGTCG CGCCCTCGCA GGCCTCGCGC ACCTTCTGGT GGGCCTGTGT GGGCTTCGTC GACAGTCTGA TCGCGCACGG CGTCGAAGCC GACTTCCACG TCAAGCAATT GCTCGCCCGC GTCGACCTGC AGATGCGGCG GCTCATGGAA GGCTCGCCGC AGGTTGCCGA ACGTCTGCTG CGCGACGCGC TCTTCTTCGT CGCGAAGAGC CAGAGCCTCG ACGGCCGTGC GGCCGAAGTC CGCGCCACCT TCGGCCTCGA TCGCTACCTG CCAGGGCGCG GCATGCTCGA TCCCGAGGCG CTGGCGCGCA TGCGCCCGGT GCTCGACGCG CTCAACGCCG GCCTGAAGGC CGCGCACGAC AACTGGCGCG CCTATGTCGA AGGCGACGCA GCGCAGTTGG TGCAATTCCA GACCCAGCTC GAACGCATGC AGCCCCAGAC GCAGATGCTC GCCGAAAGTG GCCTCAAGGC CTTGCTCGAC GGCCTCTCGG CACTTGCCGC GGCGACCGGC ACGCGTACGG GCGAAGCCCG CGAACAGGCC GAACTCGAAG TGGCGGCGAC GCTGCTCTTC CTGCAGAACG GGGTGGCGCA GGAAGACGTG CTGCATGCCG ATTTCGCCGC CCGCGCCGCT GCCCAGCATG CACGCCTGAT GGCCCTGATC GAAGGCCGCG AGATGCCGGC CGGCGCACCC GACGCCGCCG CCCAGCGCGA AGCCGAGCGT GACATGCTGA CGCACATGGC GCAGGAGGTC GGACAAAATC TGAAGCAGAT GGAGGAGGCC CTCGACGCCT TCTTCCGTGA CGAGAACGAG CGCGAGGCGC TCGCGGGCTT GCCCGCGCTG GCGCAGCAGG CCCAGGGCGC GCTGACCATG CTCGAACTGC CCGACGCGGC CGCATTGCTG ATCGCCGCGA GCGCCAGCGT GCAGCCCTTC ATCGACAGCG GCTATCCTGA CCAAGCGGCG CAGCAGCGTC TGGCCGACGC GTTCTCGAGC CTCGGGCTGT ACATCGAAGC CTACTGCGCC GGCCGCGCCG ATGCGGCGCG CATCCTGCGC CCGGTGCTGG CCGAGTTCGG TCTCACTGCG TCGAACGGCG CGGACGAAGG CGGGTTTGAC GACACCGTCG AATCCGGGCT CCCCGGGCGC AAGACCGAGG TCCGGGACAC TTATGCTGTG TGGCGGGACG ACCCGGACGG CGCGGCAAAA AAAAAATTCC TTGACGCGCT GAGCGAGCTC GGCCGCGATG CCGAGCTGAT CGACGACGTC CGACTGAAGC AGCAGACCGG ATCGGCGCTC GCTGCCTGCC GGGAGGCAGC GGCGGCACCC GTCGCACTCG ACGCCGACAT CGCCGCGCTC ACCGGACTCG CGTTACCCGC ACGTGCGACC GCCACGATCG CCGTCGATGA CGACGCCGTC ACGGAGCCGG ATGAATCCGA GCCCGTCGCA GAGGCGCCTG CCGATCCCCT GGAAGCGTTT GCCGTCACCG GACTCGAGGT CTCAGCGGAC GTCGAAGCCC CGCCGGTTTC TCTCCTCGCG GGGCTGCCCG AGGTCGAGCT CGGGCCCGAG CTGGCATCAG CATCGGCGGA CACCGGTACA AGCGCGACGG ACACTATGCT TCGCGTCGTG ATTCCCGAAG GGGCTGAGCC CGAACTGCTC GATATCTTTC TCGAGGAGGC CGAGGAGGTG CTTGCGACGA TGGGCGAGGC CTGCGAGGGC TGCCAGAGCC AGCCGGACGA CCGCGAGTCG CTGACCGTCG TGCGCCGCGC CTTCCATACG CTCAAGGGCA GTGGCCGCAT GGTCGGGCTC GAAGACCTCG GTGAGACCGC GTGGCGCCAT GAACAGCTGC TGAACGGCTG GCTCGCCGAG AAAAAACCCG TCAGCGCCGA CCTGATCCAT CTCGTCGGCC GAGCGCGTTC GGTATTCCAC GACTGGGTCG ACGCCCTCAA GACCAAGCGG ACGCCGCTGC TTCCGGTCCC TGCCTTGCTC GACGCGGTCG ACCGCGTCGC CCAAGGCCTT CCGTTCGACG CGCCGGTCGT CGAATTTGTG GCCGTGGCGC CGAGCGGGCC GACCTCTGAA CTGCCATCGC TCGACATCAG CCTCAAGGCG GCGGACGACG TGACGCCATC GGCGCAATCG GATGCCACGA TCGATGCATG GCCCGGCCTC GACGAGACCG AGCCGGGCCG CGTGGCCGCG GATTCTCCTG CCGCCGAGGC GGACTCCTGC GGCGTCGATG CGCCGCCTGT CCAGCCCGCG GTGCTCGAAG TCGAACCCGC GTTCTCGCTG CCCGAGACCA CGGGCGACGC CTTCGTCGCG CCGCCGGCGC AGCCCGAAGT GCAGCCCGTG TCCGACAACG ACGCGGCGCA TGGCGCCGTC GTCGAATACG CCCGCGTGCC GGCCGGGCAG GACGCTACGG ACGAAGTGTG CATCGGCAGC GTCTGCGTTT CGAGCGGTCT CTACGAGATT TTCGTCACTG AGGCGCATCA GCGCCTCGCG GTGCTGCAGG AAGAAAGTGC GCGGCACGCC GAAACGGTGC ATCGTGCGGT CGGTGAGGAT GCGCGGCGCG CCGTTCATAC GCTCGGCGGC ATCGCGGGCA CCGCGGGGCT CGGCGTTCTC GCCGAGTTGT CGCTCGCACT CGAGCAGTAC TGGAACCGCT TTGCCCACTT GCCGCTTCCT CCGGCGCATC TGCCGCTGGT CCAGGATACG GTCGCGCGCC TGCACGCCAT GATGGCGTCG GTCGAGGGCG GCGAGTTGCC CGAACCCGCG CACGACCTGA TCGCCGCGCT CGGCGAACTC GAGGATGAAC AGTCCGAGCT CGACGCCCAG GCATTCGCGC CGACCGCTGA GGCGAGCGGC GGCGAGGACG CAACCGGGAT CGTTGCGCCG GATTTGGACA CGGCGGCCCG CGGCGATACG CGCGCCCCGC TGCCCGACGT CAGCACATTC GTGCCCGAGA GCCCCGCTGC GGGACCGGCG CCCGTCTTCG AACGACGCGA GGTCGCCGAC GAAATCGACC AGCAGCTGCT GCCGATTTTC CTCGAGGAGG CCGACGTGCT GGTCCCCGAT ACCAGTGTTC AGCTCCGCGT GTGGAAGGCC GACCCGGCGG CGTCGGGCCC GCGCGACGCG TTGCGCCGCA ACCTGCATAC GATCAAGGGC AGCGCGCGCA TGGTCGGCGC GATGCGTCTC GGCGAGCTGA CCCACGTGAT GGAATCGCGG GTGATCGCGG TGATCGAGGG CCAGCTCAGT GCGACCGAGG CCGTGTTCGA CACGCTCGAA GCGCAGCTCG ACCGTCTTGC CGATGCCGTC GAGCGCCTCA AGCAGGGCGA GCTTGCGCCG CCGATCGACG ACGCACCGCT CGCCGCGCCG ACCGAGCCCG TGCTGCGGCC GGAAGAAGCC GCGGCGACGG CCGCTGCGGC CGAGCCGCTC GCGCCGGCGC AAGCAGCCAG CCGCGACAGT AATGCGCTTA CCTTGCGCGT CCGCGCCGAC TGGGTCGACC GCATGGTCAA TCAGGCGGGC GAGGTCGCGA TCGCACGGTC GCGGATCGAG AGCGAAGTGT TTGCCTTCAA GCGTCACGTC AACGAATTGT CGGACGCGCT GGCGCGGCTG CGCGGCCATA TCCGCGAAGT CGAAATCCAG GCCGAGTCGC AGATGCAGGC GACGTTCCAG ACCCAAGGCG TCGCGGAACA ATTCGACCCG CTCGAATTCG ACCGTTTCAC GCGTTTCCAG GAGGTCACGC GCTTCCTCGC TGAAAGCGTG AACGACATCT CGACCGTGCA GCACATCCTG CTCGCGCGGC TCGGCGAGGC CGACGCCGCC TTGATCCAGC AGACGCGACT GAACCGCGAA CTGCAGCAGG ACCTGCTGCG CGTGCGCATG GTGCCGCTCT ATTCGGTCGC TGAGCGACTG TATCGCACGG TGAGGCAGAC TGCGCGCGAC GTCGACAAGC GTGCGCAGCT CGACATCCAG GGCGGCGACC TGGAAATCGA CCGCTCGGTG CTGGAAAAAG TCACGGCGCC GATCGAGCAT CTGCTGCGCA ACGCACTGGC CCACGGCGTC GAGGCGCCCG AAGTGCGCCG CGCCGCGGGC AAGCCCGAGT TCGGCGAAAT CGTGCTGTCG GCGCGCCAGT CGGGCAACGA AATGCTGATC ACGGTGACGG ACGACGGTGC CGGCCTCGAT TACGCACGCA TTCGACAGAA GGCCGAGGAA AACGGTCTCC TGCTGCCAGG CGCCGAACCG ACCGAAAGTC TGCTCGCGCA GATGATCTTC GCCGCCGGCT TCTCCACGGC CGAAACCGTG AGTCAGGTCG CCGGACGCGG CGTCGGCATG GACGTCGTGA AAAGCGAGAT CTCGGCGCTC GGCGGCCGCA TCGACATCGC CTCGACCGCG GGCCGGGGCA CGCGCTTCGA GATCTATCTG CCATTGACGC TGGCGATGAC GCAGGCGGTC ATGGTCCAGG CGGCGAAGCA CGACTACGCG CTGCCGGCGC CGCTCGTCCA GCAGGTGCTC GAACTGAAGC CGCACGAGCT CGAGCAGGCC AGGGCCAGCG GAGAAGTCAA CTGGCGCGGC GCGCGTTACC CCTTCGCCTA TTTACCTCAC CTGCTCGGCG ACCCCGACGC GGTGCACGAA GTGCAGCGCT ACAACCCGGT CGTGCTCGTC GCCAGCGGCG CGAGCCAGGC GGCGGTGCTG GTCGACCTCA TCGAGGGAAC GCGCGAAATC GTGGTCAAGA ACATCGGCCC GCAGATCGCG CGGATCACGG GCGTCGCCGG CGCGACCGTG CGTGGCGACG GGCGCGTGAT CCTGATCCTC AATCCCGTAC CGCTGGCGCT GCGTCAGGCG AGCCAGTCGC GGAGCGCGGC GGGACGCAGC GCGCCGGTCG CGCCGGTCGA GGTCAGCGCG GCGCCGCAGC CGCCGCTGGT GCTCGTAGTC GACGATTCGC TGACCGTGCG CAAGATCACG ACGCGCCTGC TGAGTCGCGA GGGTTTCCGC GTCGACGCCG CGAAGGACGG CGTCGATGCG CTCGAGAAAA TGCACGACCT GATCCCGGAC GTCGTATTGC TCGACGTTGA GATGCCGCGC ATGGACGGCT TCGAGCTCGC GCGGGTCATG CGCGCGGACG CGCGCCTCGC GTCGGTGCCG ATCATCATGA TCACCTCGCG CACTGCGGAC AAGCACCGCA ACCACGCGCT CGAAATCGGC GTCAACGTGT ACCTGGGCAA GCCCTATCAG GAGCAGCAGC TGCTCGACGC GATCGCAGAA CAACTCGGTC AGACCGTTTC GCTACCGGCC TGA
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Protein sequence | MSALLDYDTG PLNWVRADID AALQAALGRI QAYSADGDLT NAMRLARDDA HQVAGALRMV GLEGAATLAD ALKSLLGDLD ESRAQPNDAL VRALRNAIEG LQRWVRDLAD GRGTGELALF PLYKRLRELQ GAERVFEGEL FFPDMRSRVS PGPAVALAPE ALAAEVKSAR ATFQRGLLAF LRNVDAEQGL RRMRDALAAI EQVAPSQASR TFWWACVGFV DSLIAHGVEA DFHVKQLLAR VDLQMRRLME GSPQVAERLL RDALFFVAKS QSLDGRAAEV RATFGLDRYL PGRGMLDPEA LARMRPVLDA LNAGLKAAHD NWRAYVEGDA AQLVQFQTQL ERMQPQTQML AESGLKALLD GLSALAAATG TRTGEAREQA ELEVAATLLF LQNGVAQEDV LHADFAARAA AQHARLMALI EGREMPAGAP DAAAQREAER DMLTHMAQEV GQNLKQMEEA LDAFFRDENE REALAGLPAL AQQAQGALTM LELPDAAALL IAASASVQPF IDSGYPDQAA QQRLADAFSS LGLYIEAYCA GRADAARILR PVLAEFGLTA SNGADEGGFD DTVESGLPGR KTEVRDTYAV WRDDPDGAAK KKFLDALSEL GRDAELIDDV RLKQQTGSAL AACREAAAAP VALDADIAAL TGLALPARAT ATIAVDDDAV TEPDESEPVA EAPADPLEAF AVTGLEVSAD VEAPPVSLLA GLPEVELGPE LASASADTGT SATDTMLRVV IPEGAEPELL DIFLEEAEEV LATMGEACEG CQSQPDDRES LTVVRRAFHT LKGSGRMVGL EDLGETAWRH EQLLNGWLAE KKPVSADLIH LVGRARSVFH DWVDALKTKR TPLLPVPALL DAVDRVAQGL PFDAPVVEFV AVAPSGPTSE LPSLDISLKA ADDVTPSAQS DATIDAWPGL DETEPGRVAA DSPAAEADSC GVDAPPVQPA VLEVEPAFSL PETTGDAFVA PPAQPEVQPV SDNDAAHGAV VEYARVPAGQ DATDEVCIGS VCVSSGLYEI FVTEAHQRLA VLQEESARHA ETVHRAVGED ARRAVHTLGG IAGTAGLGVL AELSLALEQY WNRFAHLPLP PAHLPLVQDT VARLHAMMAS VEGGELPEPA HDLIAALGEL EDEQSELDAQ AFAPTAEASG GEDATGIVAP DLDTAARGDT RAPLPDVSTF VPESPAAGPA PVFERREVAD EIDQQLLPIF LEEADVLVPD TSVQLRVWKA DPAASGPRDA LRRNLHTIKG SARMVGAMRL GELTHVMESR VIAVIEGQLS ATEAVFDTLE AQLDRLADAV ERLKQGELAP PIDDAPLAAP TEPVLRPEEA AATAAAAEPL APAQAASRDS NALTLRVRAD WVDRMVNQAG EVAIARSRIE SEVFAFKRHV NELSDALARL RGHIREVEIQ AESQMQATFQ TQGVAEQFDP LEFDRFTRFQ EVTRFLAESV NDISTVQHIL LARLGEADAA LIQQTRLNRE LQQDLLRVRM VPLYSVAERL YRTVRQTARD VDKRAQLDIQ GGDLEIDRSV LEKVTAPIEH LLRNALAHGV EAPEVRRAAG KPEFGEIVLS ARQSGNEMLI TVTDDGAGLD YARIRQKAEE NGLLLPGAEP TESLLAQMIF AAGFSTAETV SQVAGRGVGM DVVKSEISAL GGRIDIASTA GRGTRFEIYL PLTLAMTQAV MVQAAKHDYA LPAPLVQQVL ELKPHELEQA RASGEVNWRG ARYPFAYLPH LLGDPDAVHE VQRYNPVVLV ASGASQAAVL VDLIEGTREI VVKNIGPQIA RITGVAGATV RGDGRVILIL NPVPLALRQA SQSRSAAGRS APVAPVEVSA APQPPLVLVV DDSLTVRKIT TRLLSREGFR VDAAKDGVDA LEKMHDLIPD VVLLDVEMPR MDGFELARVM RADARLASVP IIMITSRTAD KHRNHALEIG VNVYLGKPYQ EQQLLDAIAE QLGQTVSLPA
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