| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2514 |
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| Symbol | |
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| ID | 3671833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2585832 |
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| End bp | 2586446 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637711220 |
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| Product | putative lipoprotein |
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| Protein accession | YP_316272 |
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| Protein GI | 74318532 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3417] Collagen-binding surface adhesin SpaP (antigen I/II family) |
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| TIGRFAM ID | [TIGR02722] uncharacterized proteobacterial lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.284557 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTTAT CCCTCTCCTC ATCGCTTGCC AGGGTGTCGT TCGTCTTGGG CGTCGTCGCG
CTTCTCGGTG GTTGTGCCTC GACCGGCAGT CCGGTCGTCG GCGGCAACGT GCAGTATGGC
GACTCCAAGG CCGTGGAAAC CGTGACCAAC GAGTTCGGCT CGACCGACCT GCAGACGATC
GCGGAATCCA TGACCCGCTC GCTGTTGCAG TCACAGGTGA TTGCGCGCGG CGGGCGGCCG
CTCGTCACGG TCGCGGACGT GAAGAACAAG ACCAGCGAAT ACATTGACAC CCGCTCGGTT
ACCGATTCGA TTCGTGCGCA ATTACTCAAA AGCGGCGCCG TGCGTTTTGC CGTGGATCAC
GACGCGATGC AGGCACAGAC GGACGAGCTG ATCCGGCAAA ATCAAACGGG CCTGTATAAA
AAGAGTGCCA CCAAGAAAAT CGGCCGGATG CAAGGTGCGG ATTATCGGCT CGAGGGCAAC
ATCACCTCGA TCGTGAAACG TTCCAGCAGC GTGAAGGACG TGTATTACAA ATTCAGTCTT
GTCCTCGTCG ACATCGAATC CGGCGTCCTC GAATGGGCAG ACGAGAAGGA AATCCGCAAG
ACGTCCGTGC GCTAA
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| Protein sequence | MPLSLSSSLA RVSFVLGVVA LLGGCASTGS PVVGGNVQYG DSKAVETVTN EFGSTDLQTI
AESMTRSLLQ SQVIARGGRP LVTVADVKNK TSEYIDTRSV TDSIRAQLLK SGAVRFAVDH
DAMQAQTDEL IRQNQTGLYK KSATKKIGRM QGADYRLEGN ITSIVKRSSS VKDVYYKFSL
VLVDIESGVL EWADEKEIRK TSVR
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