Gene Tbd_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2501 
Symbol 
ID3671820 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2573303 
End bp2574394 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content67% 
IMG OID637711207 
ProductPAS/PAC sensor Signal transduction histidine kinase 
Protein accessionYP_316259 
Protein GI74318519 
COG category[T] Signal transduction mechanisms 
COG ID[COG3852] Signal transduction histidine kinase, nitrogen specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATGC CGTCGCCCTC TTACCCCGAG TATGCCGGAC TGGACTGCCT GTCCACGGGT 
GCCATGATTC TCGATGGCGC GGGCGGGGTC GTCTATCTGA ACCCCGCTGC CGAGACGCTG
CTCGGCGTGT CCGGGGTGCT CCTCGTCGGC GCCGAGGCGT CCACACTCTT CGAGCGCAGC
CCCGAATTGC TGGCAGCGAT CGAGACCGCG CGCACCCAGC AGGAAACCGT CGTCGAATAC
GAACTCGATG TCGTCGCCAG CGGGCATCCG CCGATACGCG TCGGCTGCAG CGTCTCGCCG
CTCGAGCGGC CGCGCTACGG CGTGCTGGTT GAAATGCGCG CGGTCGACCC GCAGTTGCGC
ATCGCGCGGC TGGAGCAGGC GCGGCTTCAG CAGGAAGCCA ACCGCGAGCT CCTGCGCAAC
CTCGCGCACG AAATAAAAAA CCCGCTCGGC GGCATCCGCG GCGCGGCGCA GCTGCTCGAA
CACGAACTCC CTCGGGAAAG CCTGCGCGAG TACACCCAGG TCATCATCAA GGAGTCCGAC
CGCCTTCAGT CGCTGATGGA GCGCCTACTG ACGCCGCACC GCGTGCCGCA TTTCGGTGCA
GTGAACATTC ATGAGGTGCT CGAGCGGGTT CGCAGCCTCG TTCTCGCCGA AACGCCCGGC
GTCACGCTGC GCCGCGACTA CGACGTCAGC CTGCCCGAAA TCCGCGGCGA CGCCGAGCAG
CTGATCCAGG CGACGCTCAA CATCGCGCGC AACGCGGTGC AGGCCATGCA CGGTAACGGG
GCCGGACATG GTAATGGACA CGGGCGCGGC GCGGGCGAGC TGGTGTTCCG CACCCGTGTC
GCGCGCCAGA TCACGCTCGA GAGTCGGCGC TATCAACTGG GCCTGCGCGT CGAGATCATC
GACAACGGCC CCGGCATTCC CGACAGCATT CGCGACCAGA TCTTCTTTCC GCTGGTGTCG
GGGCGCGAAG GCGGCAGTGG CCTCGGCCTC GCCGTCGCGC AGACCCTGGT CTCGCAGAAC
CACGGCACGC TCGATTGCGA AAGCCGCCCC GGGCGGACCG TGTTTTCAAT CTTTCTCCCA
CTGCCCGTCT GA
 
Protein sequence
MSMPSPSYPE YAGLDCLSTG AMILDGAGGV VYLNPAAETL LGVSGVLLVG AEASTLFERS 
PELLAAIETA RTQQETVVEY ELDVVASGHP PIRVGCSVSP LERPRYGVLV EMRAVDPQLR
IARLEQARLQ QEANRELLRN LAHEIKNPLG GIRGAAQLLE HELPRESLRE YTQVIIKESD
RLQSLMERLL TPHRVPHFGA VNIHEVLERV RSLVLAETPG VTLRRDYDVS LPEIRGDAEQ
LIQATLNIAR NAVQAMHGNG AGHGNGHGRG AGELVFRTRV ARQITLESRR YQLGLRVEII
DNGPGIPDSI RDQIFFPLVS GREGGSGLGL AVAQTLVSQN HGTLDCESRP GRTVFSIFLP
LPV