| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2471 |
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| Symbol | |
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| ID | 3671790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2546872 |
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| End bp | 2548311 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711177 |
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| Product | uroporphyrinogen-III C-methyltransferase |
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| Protein accession | YP_316229 |
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| Protein GI | 74318489 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase
[TIGR01470] siroheme synthase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0675252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTATC TGCCGATTTT CCTCGACCTG CGCGACCGTC ACTGTCTTGT CGTGGGCGGT
TCCGAGACGG CCGCGCGCAA GGCCGAATTG CTGCTGCGCG CCGGCGCGCA CGTCGCCGTC
GCCGCGCCGG CCCTGCACGC GGGCTTCGAG CAGTTGCCTG ACCGGCAGCG GCTCACGCGT
GTCGCCGACA CCTTCAGCCC CGCGCTGCTC GACGGCAAGG ATGCGGTCAT CGTCGTCGAG
GACGATGCGG CGGCGGCGCA GATCGTCGCC GACGCTGCGC GCGCGCGTCA CCTGCCCGTG
AACGTCGCCG ACAAGCCGGC GCTGTGCAGC TTCATCCTGC CGTCGATCAT CGACCGCTCG
CCGATCATGG TCGCGGTCTC GAGCGGCGGC GAATCGCCGG TGCTCGCCCG GCTGCTGCGC
GCGCGGCTCG AGACGTTGAT TCCTGCCGCC TACGGCCGGC TCTCGGCGCT CGCCTCGCGC
TACAAGGCGC GTGTGCGCGA AGCGATCCAG CCTGGGCAGC GCCGCGCCTT CTGGGAAAAG
GTCTTCCTCT CGTCGGTCGC CGAAATGGTG TTTTCCGGGC GCGACAGCGA GGCCGAAGCG
CAGCTCGAGG CGATGATCAA GGACAGCGCC GCGCACGAGC CGGCGCGCGG CGAGGTCTAC
CTCGTCGGCG CGGGTCCGGG CAACCCCGAC CTGCTGACCT TCCGCGCGCT GCGCCTGATG
CAGCAGGCCG ACGTCGTCGT CTACGACCGC CTCGTCTCGC AGCCCATCCT CGACATGTGC
CGGCGCGACG CCGAACGCAT CTACGTCGGC AAGGAACGCG ACGACCATGC GGTGCCGCAG
GAAGAAATCA ACATGATGCT CGTGCGCCTC GCCAAGGAGG GTAAGCGCAC GCTGCGCCTC
AAGGGTGGCG ACCCGTTCAT CTTCGGCCGC GGCGGCGAGG AGATCGAGAC GCTGGTCGAG
CACGGCGTGG CATTCCAGGT CGTCCCCGGC ATCACGGCGG CGGCGGGCGT CGCCTCGTAT
GCCGGCATTC CTCTGACCCA TCGCGATTAC GCGCAGTCGG TCGCCTTCGT CACCGGTCAC
CTGAAGGAAA ACACCTTCAA CATGAACTGG GAGGGCATCG CGCGCCGCGA CCAGACGATC
GTCATCTACA TGGGGCTGAA GGGCTTGCCG ATGCTGTGCG AAGCCTTGAT CAAGCACGGG
CTGACCGCCG ACACGCCGGC GGCGATCGTC CAGCACGGCA CGCTGCCGAC GCAGCGTGTC
ATCACCGGCA CGCTCGCGAC GCTGCCGACG CTCGCCGTGG AGGCCGGCCT CAAGGCACCG
ACGCTGATCA TCGTCGGCAA CGTCGTCAAA TTGCGCGAGA AGCTCGCCTG GTACCGGCCG
CAGGCCGCCG GCGAAGCGGC CGCCGCCACT CCGCTCGAAG CCCCCGACCA CCTCGCCTGA
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| Protein sequence | MNYLPIFLDL RDRHCLVVGG SETAARKAEL LLRAGAHVAV AAPALHAGFE QLPDRQRLTR
VADTFSPALL DGKDAVIVVE DDAAAAQIVA DAARARHLPV NVADKPALCS FILPSIIDRS
PIMVAVSSGG ESPVLARLLR ARLETLIPAA YGRLSALASR YKARVREAIQ PGQRRAFWEK
VFLSSVAEMV FSGRDSEAEA QLEAMIKDSA AHEPARGEVY LVGAGPGNPD LLTFRALRLM
QQADVVVYDR LVSQPILDMC RRDAERIYVG KERDDHAVPQ EEINMMLVRL AKEGKRTLRL
KGGDPFIFGR GGEEIETLVE HGVAFQVVPG ITAAAGVASY AGIPLTHRDY AQSVAFVTGH
LKENTFNMNW EGIARRDQTI VIYMGLKGLP MLCEALIKHG LTADTPAAIV QHGTLPTQRV
ITGTLATLPT LAVEAGLKAP TLIIVGNVVK LREKLAWYRP QAAGEAAAAT PLEAPDHLA
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