Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2468 |
Symbol | |
ID | 3671787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2540420 |
End bp | 2544043 |
Gene Length | 3624 bp |
Protein Length | 1207 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637711174 |
Product | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
Protein accession | YP_316226 |
Protein GI | 74318486 |
COG category | [C] Energy production and conversion |
COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | [TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCTATA AAGAGTTTGC CATGAGTCAC GCGCTCACGA TCGACGGCAA CGAGGCGGTC GCGCGCATCG CCTACCTCGC CAACGAGGTG ATCGCGATCT ATCCGATCAC CCCCGCGTCG AGCATGGGGG AATGGGCCGA CGAGTGGGCC GCGCAGGCCC GCACCAACCT GTGGGGCGCG GTCCCCAAGA TCATCGAGAT GCAGTCCGAG GGCGGGGCGG CCGGGGCGCT GCACGGTGCG CTGACCTCGG GGGCGCTGGC GACGAGCTTC ACCGCCAGCC AGGGGCTGCT GCTCATGATC CCTAACCTAT ACAAGCTCGC CGGCGAACTG ACGCCCTTCG TGCTGCACGT CGCGGCGCGG GCGATCGCGA CCCACGCGCT GTCGATCTTC GGCGACCACT CGGATGTCAT GGCGTGTCGC GCGACCGGCT GCGCCTTGCT CGCGTCGAAT TCGCCGCAGG AGGCCCAGGA CTTCGCGGTC ATCGCCCAGG CCGCGACGCT CGCCGGCCGC ATTCCGGTGA TCCATTTCTT CGACGGCTTC CGCACCTCGC ACGAGGTCGC GAAACTCGTC GCGGTGGACC CCGAGACCCT GCGCGCGATG CTCGACCCCG CGCACATCGC CGCGCACCGC GCGCGCGCCT TGTCGCCCGA GCATCCGGTG CTGCGCGGCA GTTCGCAGAA TCCCGACGTC TTCTTCCAGT CGCGCGAGCG CGCGAATCCC TACTACGACG CCTTCCCGCA GCACGTGCAG GATGCGATGG ACCGCTTCGC CACGCTGACC GGACGGCGCT ACCGTCTGTT CGACTACGTC GGCAGCGCGG ACGCCGAGCG CGTGATCGTG CTGATGGGCT CGGGCGCGGA GAGCGTGCAC GAGACCGTCG ACCATCTGTG CGCGCGGGGC GAGAAAGTCG GCGTGCTCAA GGTGCGCCTG TATCGACCGC TGGCGGCGGA CGCACTGCTG GCGGCCTTGC CGGCGAGCGT CTCCGGCATC GCCGTGCTCG ACCGCACGAA GGAGCCCGGC GCCGACGGTG AGCCGCTCTA CAAGGACGTC GTCACGGCGC TCGCGCAGGC GAGTGCCGAT GGCATGCGCA CGATGCCGCG CGTGATCGGC GGCCGCTATG GGCTCGCGAG CAAGGAATTC ACGCCGGGGA TGGTCAAGGC GGTCTTCGAC GAACTCGGCC GCTCCTCGCC GAAGCCCGCC AAGCCAGGGA AAGACCGGAT GCGCGAGTTC ACAGTCGGCA TCCACGACGA CCTGACGCAG CGCTCGTTGC CCTGGGATGC CGAGTTCCGC ACCGACGCGT CGCGCACGCT GCAGCACGCG GTGTTCTGGG GGCTCGGCTC GGACGGGACG GTGTCGGCGA ACAAGAACTC GATCAAGATC CTCGGCGAGG CCACGCCGCT CGACGCGCAG GGCTACTTTG TCTACGACTC GAAGAAATCG GGCGCGGTCA CGGTCTCGCA CTTGCGCTTC GGCGCCGGAC CGATCCGCTC GGCCTATCTC GTCGAGCCCG GCATGGCCGG CTTCGTCGCC TGCCACCAGC CCGTGTTCGT CGAGCGCTAT GAGCTGCTCG CGCACGCCGC ACCGGGCGCG GTCTTCCTGC TCAACACCGA CGCCGCGCCC GACGCGGTGT GGAACACGCT GCCCGCCGCG ATGCGCGCGC AGATTCGCGA AAAAGCGCTG CAGCTCTGGG TCGTCGACGC CTACGCGGTC GCCAACGAGA GCGGAATGGG GCGACGCATC AATACGATCA TGCAGACGTG TTTCTTCGCG ATCTCCGGCG TCCTGCCGAA GGACGAGGCG ATTGCAGCGA TCAAGCAGGC GGTCGACAAG ACCTACGGCA GAAAGAGCCG CCGCCTCGTG GAACTGAATT ACCGCGCGAT CGATAGCGCC TTGGGCGCGC TGCACCGGGT CGACATCCCG GCCGCCGATT CCGTCCAGCC GCCGCGCGCG CCCGCCGCCC CGGCGCAAGA CCTGCCGGAC TTCGTACGCG AGCTCACGCT GCCGCTCTAC CACGGCCACG GCGACGGCCT GCCGGTCTCG GCGCTGCCCG CCGACGGGAC GTTTCCGCTC GGCACGGCGA AATACGAAAA GCGCAACATC GCCCTCGAGA TCCCGGTGTG GGAGCCCGAC CTCTGCACGC AGTGCGGCAA GTGCGTCTTT GTCTGCCCGC ACACCGCGAT TCGTGCGCGC GCGTTTCCCG CCGAGGCCGC GGCCGATGCG CCGCCCGCCT TCAAGCACGT CGCGGCGAAG AGCAAGGAAC TGCCTGCCGG CACCCGCGTG AGCTACCAGG TCGCCGCCGA GGACTGCACC GGCTGCGGCG ACTGCGTCGA GGCCTGTCCG ATCCACGACA AGTCAAACAT CGGGCGGCGC GCCGTCAACA TGGCGCCGGT CGGGCCGCTG CGCGAGCAGG AGCGCGACAA CCTCGCGTTC TTTCTGCGCC TGCCCGAGTT CGACCGCGGC CTGATTAACC CGACGACCAT CCCCGGCTCG ATGCTGCTCG ATTCGCTGTT CGAGTTTTCG GGCGCCTGCG CGGGCTGCGG CGAGACGCCT TACATCCGGC TCGCGACCCA GCTCTTCGGC GACCGCATGC TGATCGCCAA CGCGACGGGC TGCTCGTCGA TCTACGGCGG CAATCTGCCG AGCACGCCGT ACACCGTGAA CGGCGCGGGG CGCGGGCCGG CGTGGAGCAA TTCACTGTTC GAGGACAACG CCGAGTTCGG CCTCGGCATG CGGCTCGCGG CCGACCAGTT GATGGACTAC GCGAAGCAAC TGACGCGCGA CCTTGCCGGC GCAGTCGGCG GCGACCTCGC GGCCGAACTT GTCGACGCCG ACCAGCGCGA TGAAGCCGGC ATCGTCGCCC AGCGCGCCCG CGTCGCGCGG CTGGGCGAAA AGCTCGCGAA GTCCGCACAC CCGCGCGCCG CCGAACTCGC GAGCGTCGCC GAATGGCTGA TCCGTCGCTC GGTCTGGATC ATCGGCGGCG ACGGCTGGGC CTACGACATC GGCTACGGCG GCCTCGACCA CGTGCTCGCC TTGCCCTACG ACGTCAACAT CCTCGTGCTC GATACCGAGG TCTATTCGAA TACCGGCGGC CAGACCTCTA AGGCGACGCC GCTCGGCGCC GTCGCCAAGT TCGCGGCCGG TGGCAAGACC ACGGCGAAGA AAGACCTCGC CAAGCTCGCG AGCGATTACG GGCACGTCTA CGTCGCGACC GTCGCCTACG GCGCCAAGGA CGTGCAGACG TTGCGCGCGT TCCGCGAAGC CGAGTCCTAC CCGGGACCCT CGCTCATCGT CGCCTACAGT CCCTGCATCG CGCACGGCTA CGACATGCTC TACAACCAGC GCCAGCAGGA GCTCGCGGTC AAGAGCGGGC ACTGGCCGCT GTTCCGCTTC GACCCGCGCG TTGCCGAGTC GGGCAGCAAC CCGTTCAAGC TCGACTCGGC ACCGCCGAGC CAGCCGATCC GCGCCTTCAT GGAGTCGGAA ACGCGCTTCG CGATGCTCGC GCGCAGTCAC CCCGAAGCGG CGCAGCGTTT TCTCGCGCAG GCGCAGCAGG ACGCCGAGCG CCGCTTCAAG CTGTACCAGG AAATGACGTT AAACCCAGAC AATAAACCTC AAGCGGGACC CTGA
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Protein sequence | MSYKEFAMSH ALTIDGNEAV ARIAYLANEV IAIYPITPAS SMGEWADEWA AQARTNLWGA VPKIIEMQSE GGAAGALHGA LTSGALATSF TASQGLLLMI PNLYKLAGEL TPFVLHVAAR AIATHALSIF GDHSDVMACR ATGCALLASN SPQEAQDFAV IAQAATLAGR IPVIHFFDGF RTSHEVAKLV AVDPETLRAM LDPAHIAAHR ARALSPEHPV LRGSSQNPDV FFQSRERANP YYDAFPQHVQ DAMDRFATLT GRRYRLFDYV GSADAERVIV LMGSGAESVH ETVDHLCARG EKVGVLKVRL YRPLAADALL AALPASVSGI AVLDRTKEPG ADGEPLYKDV VTALAQASAD GMRTMPRVIG GRYGLASKEF TPGMVKAVFD ELGRSSPKPA KPGKDRMREF TVGIHDDLTQ RSLPWDAEFR TDASRTLQHA VFWGLGSDGT VSANKNSIKI LGEATPLDAQ GYFVYDSKKS GAVTVSHLRF GAGPIRSAYL VEPGMAGFVA CHQPVFVERY ELLAHAAPGA VFLLNTDAAP DAVWNTLPAA MRAQIREKAL QLWVVDAYAV ANESGMGRRI NTIMQTCFFA ISGVLPKDEA IAAIKQAVDK TYGRKSRRLV ELNYRAIDSA LGALHRVDIP AADSVQPPRA PAAPAQDLPD FVRELTLPLY HGHGDGLPVS ALPADGTFPL GTAKYEKRNI ALEIPVWEPD LCTQCGKCVF VCPHTAIRAR AFPAEAAADA PPAFKHVAAK SKELPAGTRV SYQVAAEDCT GCGDCVEACP IHDKSNIGRR AVNMAPVGPL REQERDNLAF FLRLPEFDRG LINPTTIPGS MLLDSLFEFS GACAGCGETP YIRLATQLFG DRMLIANATG CSSIYGGNLP STPYTVNGAG RGPAWSNSLF EDNAEFGLGM RLAADQLMDY AKQLTRDLAG AVGGDLAAEL VDADQRDEAG IVAQRARVAR LGEKLAKSAH PRAAELASVA EWLIRRSVWI IGGDGWAYDI GYGGLDHVLA LPYDVNILVL DTEVYSNTGG QTSKATPLGA VAKFAAGGKT TAKKDLAKLA SDYGHVYVAT VAYGAKDVQT LRAFREAESY PGPSLIVAYS PCIAHGYDML YNQRQQELAV KSGHWPLFRF DPRVAESGSN PFKLDSAPPS QPIRAFMESE TRFAMLARSH PEAAQRFLAQ AQQDAERRFK LYQEMTLNPD NKPQAGP
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