Gene Tbd_2433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2433 
Symbol 
ID3673943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2502986 
End bp2505091 
Gene Length2106 bp 
Protein Length701 aa 
Translation table11 
GC content66% 
IMG OID637711139 
Productoligopeptidase A 
Protein accessionYP_316191 
Protein GI74318451 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTCG CCATGAATAC CCCCAAGGGC TCCAACCCCC TGCTCGACTT CTCCGGCCTG 
CCCCGCTTCG CCGAGTTCAA GCCCGAATAC GTCACCCCGG CGGTCGACGC GTTGCTGGCG
GAGTGCCGCG CCGCGGTCGC CCGCGCCGAG GCCGCCGACA CGCCGGCCGA ATGGGACGCC
TTCGTCGCCC CGCTCGAGGA TGCGAACGAG AAGCTCGGCC GCGCCTGGGG CCAGGCTTCC
CACCTGCACT CGGTCATGGA TTCGCCCGAG TTGCGCGAGG TCTACAACGC CAATCTGCCG
AAGATCACGG TCTATTACGC CGAACTCGGG CAGAACGAGG CCTTGTACGC CAAATACAAG
GCCCTCGCCG CGAGTCCCGC GTTTGCCGCG CTGTCGCCCG CCCGCAGGAA AGTCGTCGAC
AACGAGTTGC GTGGCTTCCG TCTCGGCGGC GCCGAGCTGC CGGCCGACAA GAAGGCGCGC
TTCATGCAGG TGCAGGAGGA ACTCGCGCAG TTGTCCACCA AGTTCGAGGA AAACCTGCTC
GACGCGACCA ACGACTACGC GCTCATCATC GACGAGAAGG GCGAGCTCGC CGGCATTCCC
GACGACGTGC TGGAAGCCGC GCGCGCCGCG GCCGAGGCCG CCGGCACCAC CGGCTGGAAG
TTCACGCTGC ACATGCCGTC CTACCTGCCG GTGATGCAGT ACGCCGACAG CCGCGAACTT
CGGCAGATCC TTTACCGCGC CTACGTCACC CGTGCCTCCG AGTTCGGCAA GCCCGAGCTC
GACAACACGC CGCTGATCGC GCGCATCCTC AAGCTGCGCC GAGAGTCCGC CGAGTTGCTG
GGTTTCAAGA GCTACGCCGA GGAGTCGCTC GAAGCCAAGA TGGCCGAATC GCCGCGCGAG
GTGCTGGATT TTCTCGACGA GCTCGCCGCG CGTGCCCGCC CCTACGCGGA GAAAGACTAC
ACCGAACTCA AGACCTTCGC CCGCGACGAA CTGGGCCTGG ACGAGGTCGA AGCCTGGGAC
ACGACCTACG TCTCGGAAAA ACTGAGCGTC GCGCGCTACA GCTTCTCGGA CCACGAAGTG
AAGCAGTATT TCCCCGAGCC GCGCGTGCTC GCAGGCCTGT TCCGACTGAT CGAAACGCTG
TACGGCCTGC ACATCCGCGA GGACAACGCG CCGGTGTGGC ACCCCGACGT GAAGTTCTAC
ACGCTTTACG ACCGCGCCGG CCAGCGCATC GGCCAGTTCT ACCTCGACCT CTACGCGCGC
GCCTCGAAGC GCGGCGGCGC CTGGATGGAC GACGTCATCA CCCGCCGTCG CCTGCCTTCA
CTCGATGGGC GGGCAGAGGG CATGCAGACG CCGGTGGCCT ACCTGAACTG CAATTTTTCT
GCGCCGGTGG GCGACACCCC CGACGGGGGC AAGAAACCCG CGCTGTTCAC CCACGACGAG
GTCATCACGC TGTTCCACGA GATGGGCCAC GGCCTGCACC ATCTGCTGAC CCAGATCGAG
GAGCTGGGCG TCTCCGGAAT CAACGGCGTC GAATGGGACG CGGTCGAACT GCCGAGCCAG
TTCATGGAAA ACTTCTGCTG GGAATGGGAC GTGCTCAAGC ACATGACCGC CCACGTCGAT
ACCGGCGAGC CGCTGCCGCG CGTGCTGTTC GACAAGATGC TCGCGGCGAA GAACTTCCAG
GCCGGCCTGC AGACGCTGCG CCAGATCGAG TTCGCGAGCT TCGACATGCA TCTGCACGAC
GATTTCGACC CGAACGGCGT ACGCACCGCG CAGGATCTGA TCGACGACAT CCGCAAGAAG
GTCGCGGTCA TCATCCCGCC CGCGTACAAC CGCTTCCCCA ACAACTTCTC GCACATCTTC
GCCGGCGGCT ACGCGGCCGG CTACTACAGC TACAAGTGGG CCGAAGTCCT GTCGGCCGAC
GCCTATGCGC TGTTCGAGGA CGAGGCCGAG GGCTACGGCG GCGTGCTGAA TCCCGAGGTC
GGCCACCGGT TCTGGAGCGA GATCCTGGCG CAGGGCGGCG CGCGCCCGGC GCTCGAGTCG
TTCAAGGCCT TCCGAGGCCG CGAGCCGACG ATCGACGCAC TGCTGCGGCA CAACGGCATG
GCGTGA
 
Protein sequence
MVVAMNTPKG SNPLLDFSGL PRFAEFKPEY VTPAVDALLA ECRAAVARAE AADTPAEWDA 
FVAPLEDANE KLGRAWGQAS HLHSVMDSPE LREVYNANLP KITVYYAELG QNEALYAKYK
ALAASPAFAA LSPARRKVVD NELRGFRLGG AELPADKKAR FMQVQEELAQ LSTKFEENLL
DATNDYALII DEKGELAGIP DDVLEAARAA AEAAGTTGWK FTLHMPSYLP VMQYADSREL
RQILYRAYVT RASEFGKPEL DNTPLIARIL KLRRESAELL GFKSYAEESL EAKMAESPRE
VLDFLDELAA RARPYAEKDY TELKTFARDE LGLDEVEAWD TTYVSEKLSV ARYSFSDHEV
KQYFPEPRVL AGLFRLIETL YGLHIREDNA PVWHPDVKFY TLYDRAGQRI GQFYLDLYAR
ASKRGGAWMD DVITRRRLPS LDGRAEGMQT PVAYLNCNFS APVGDTPDGG KKPALFTHDE
VITLFHEMGH GLHHLLTQIE ELGVSGINGV EWDAVELPSQ FMENFCWEWD VLKHMTAHVD
TGEPLPRVLF DKMLAAKNFQ AGLQTLRQIE FASFDMHLHD DFDPNGVRTA QDLIDDIRKK
VAVIIPPAYN RFPNNFSHIF AGGYAAGYYS YKWAEVLSAD AYALFEDEAE GYGGVLNPEV
GHRFWSEILA QGGARPALES FKAFRGREPT IDALLRHNGM A