Gene Tbd_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2425 
Symbol 
ID3673935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2495263 
End bp2495676 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content60% 
IMG OID637711131 
Producttransmembrane protein 
Protein accessionYP_316183 
Protein GI74318443 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTGGC TGAAATCGTT TCATATCGTC ATGGTCGTGA GCTGGTTCGC CGGGCTGTTC 
TACCTGCCGC GCCTCTTCGT CAACCTGGCG ATGGAAACCA ACCCCGCCGC CTACGACCGC
CTGCTGCTGA TGGCGCGCAA ATTGTATCGG TTCGTCTCGC CGATCATGTG GCTGACCGTG
ATCACCGGCG TCTGGCTGTG GCTTGCCTAC TGGCTTCCGA CCGGGACCTG GTTGTGGCTC
AAGGTCGCGC TCGTCGCCGG GCTCGTCGGC TACAACCATG TCTGCGGCCG TCTGCTGAAG
CAATTCCAAG CACGGCGGAA TAGCAAATCC CACGTCTGGT TTCGCTGGTT CAACGAAATC
CCCGTTCTCG TGCTGCTCGT CGTCGTGCTG CTGGTCGTAT TGAAACCGTT CTAG
 
Protein sequence
MLWLKSFHIV MVVSWFAGLF YLPRLFVNLA METNPAAYDR LLLMARKLYR FVSPIMWLTV 
ITGVWLWLAY WLPTGTWLWL KVALVAGLVG YNHVCGRLLK QFQARRNSKS HVWFRWFNEI
PVLVLLVVVL LVVLKPF