| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2406 |
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| Symbol | |
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| ID | 3672286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2477203 |
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| End bp | 2478903 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637711112 |
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| Product | methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor |
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| Protein accession | YP_316164 |
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| Protein GI | 74318424 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCA ATCTGCCCGT TACGAACCAT GCCTACGAAC TGAGCGAGGG CGACACGCTC
GTTTCCAAGA CCGATCGCGA GGGGGTGATC GTCTACGCCA ACCCGGCGTT CGTCGAGGCG
AGCGGCTACA CCGAGGCGGA ACTCATCGGC CAGCCGCACA ACCTCGTTCG CCACCCGGAC
ATGCCGCCGG AGGCCTTTGC CGACCTCTGG TCAACCCTGC AGGCGGGGCT GCCGTGGACC
GGGCTCGTGA AGAACCGGCG CAAGAACGGC GATTTCTACT GGGTCCAGGC GAACGTCACT
CCGGTCCGCG AAGATGGCGT TCTGAGCGGC TTCCTGTCGG TACGCACCAG ACCGACCCGC
GAACAGATCG CCGAGGCGGA GCAGCTGTAT CGGCAGTTGC GCGAAGGGTC GCCGAAGCGC
CTCGAAATCC GCCGTGGCGT CGTGTCACGC GGCGGCCTGG TCGGTCGTCT GCTGGCGTTC
CGCCGCATCC CGGTCAATAC GCGCATCCTG CTGAGCACCG CAATCGGCGC GACGCTGATG
CTCGCGGGCG GGGTGTTCGG CTGGTACGAG ACGAGCGCGC TCGCCCGCGC CGCCGGCGTC
GACAGCGTCA TCCCGACCGT CGTGGCGGCT GCCGGCGCGG TCGGTGCCGT GCTGACGCTG
CTGTTCGGCT ACTTCATTTC GCGCACGATC CTGCGCCCGC TCGACCGCGC GCTGGGTGTC
GCCCGTGCGA TCGCGGGCGG TGACCTGTCG CACCGCTTCG AAGTGACGGC GTGGGAGGAA
ACCGGGCAAC TGATGCTCGC GCTGCAGCAG ATGACGGCGA ACATGGTCGC CGTGCTGAGC
GACATCGGTT CCAACGTCGG CAGTATTCGT GTCGCAACGG GCGAGATCGC GGCCGGTAAC
GCGGATCTGG CAGGACGGAC CGAATCGCAG GCGTCGAATC TGGAACAGAC CGCGGCGTCG
ATGGAGGAAC TCACGGGTAC GGTCAAGCAG AACGCCGAGC ACGCGCGCCA CGCCAACCAG
CTCGCCGACG CGGCGACCGA TATCGCAGTC AAGGGCGGCG GCGTCGTCAA TCAGGTCGTC
GACACGATGA CGTCGATCAA GGCGAGTTCG GCGCGCATCT CCGACATCAT CAGCGTCATC
GACGGGATCG CGTTCCAGAC CAACATCCTC GCCCTGAACG CGGCGGTCGA GGCGGCGCGC
GCCGGCGAGC AGGGGCGGGG CTTCGCCGTC GTCGCCACCG AGGTCAGGCA TCTCGCGCAG
CGCTCGACGC TCGCCGCGCG GGAAATCAAG GACCTGATCG GCGACTCGGT CGAAAAAGTT
GAGCAGGGCG CCAAACTCGT CGACCAGGCC GGGGAGGCGA TGGACGATAT CGTCACCTCG
GTCGAACTCG TCGCCGGGAT CGTCGGCGGC ATCGCGACCG CGAGCCAGGA GCAGCACGCG
GGCATCGAGC AGGTCAACGA GGCGGTCGGG CAGATGGACG AAATCACGCA GCAAAACGCG
GCGCTCGTCG AGGAGGCGGC CGCCGCCGCG CAAAGCCTGC ACGAACAGGC AGACCGGCTC
GCTCAGGCTG TCGGGGTGTT CAGCCTCGGG CGAGGGCGCG CGCGCTCCCA GCCGGCAGGA
ACGCGCCCCG CGCCGCGGCT GATGCCGGCC GCGTCACCTC AGAAGCGTCG CGGCACCGCC
GCGCGGGCAA TCGGCCGCTG A
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| Protein sequence | MRVNLPVTNH AYELSEGDTL VSKTDREGVI VYANPAFVEA SGYTEAELIG QPHNLVRHPD
MPPEAFADLW STLQAGLPWT GLVKNRRKNG DFYWVQANVT PVREDGVLSG FLSVRTRPTR
EQIAEAEQLY RQLREGSPKR LEIRRGVVSR GGLVGRLLAF RRIPVNTRIL LSTAIGATLM
LAGGVFGWYE TSALARAAGV DSVIPTVVAA AGAVGAVLTL LFGYFISRTI LRPLDRALGV
ARAIAGGDLS HRFEVTAWEE TGQLMLALQQ MTANMVAVLS DIGSNVGSIR VATGEIAAGN
ADLAGRTESQ ASNLEQTAAS MEELTGTVKQ NAEHARHANQ LADAATDIAV KGGGVVNQVV
DTMTSIKASS ARISDIISVI DGIAFQTNIL ALNAAVEAAR AGEQGRGFAV VATEVRHLAQ
RSTLAAREIK DLIGDSVEKV EQGAKLVDQA GEAMDDIVTS VELVAGIVGG IATASQEQHA
GIEQVNEAVG QMDEITQQNA ALVEEAAAAA QSLHEQADRL AQAVGVFSLG RGRARSQPAG
TRPAPRLMPA ASPQKRRGTA ARAIGR
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