Gene Tbd_2402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2402 
Symbol 
ID3672282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2474912 
End bp2475370 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content60% 
IMG OID637711108 
Productpreprotein translocase subunit SecB 
Protein accessionYP_316160 
Protein GI74318420 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CGCAGCAGCC CGTATTCAAC ATCGAGAAAC TCTACGTCAA GGATTTGTCG 
GTCGAGGTTC CGAATGCCCC CGCCGTCTAC CTCGAACGCG AAGCGCCGCA GATGGAAGTC
AACATGTCGA CCGAAAGCCG CGCGCTCAAC GAAGACATGT ATCACAGCAG CATCACGGTG
ACGGTCACGG CGAAGCTCGG CGACAAGACG ATGTTCCTCG TCGAATGTAC GCAAGCCGGC
ATCTTCCGCA TCCAGAACGT ACCCCAGGAC CAGATGCCGA TGGTCCTCGG CATCGGCTGC
CCGAACATCG TTTTCCCCTA TCTCAGGGAG ACCGTGTCCG ACGTCGTGAT CCGCGCGGGC
TTCCCGCCTC TGCTCCTGAA CCCGGTCAAC TTCGAAGCCA TTTTCGTGCA GCAACAGCAG
GCCCAGCAGC AACAGGCGGG CGCCGCGCAG ACGCATTGA
 
Protein sequence
MSDAQQPVFN IEKLYVKDLS VEVPNAPAVY LEREAPQMEV NMSTESRALN EDMYHSSITV 
TVTAKLGDKT MFLVECTQAG IFRIQNVPQD QMPMVLGIGC PNIVFPYLRE TVSDVVIRAG
FPPLLLNPVN FEAIFVQQQQ AQQQQAGAAQ TH