| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2378 |
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| Symbol | |
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| ID | 3672338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2451958 |
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| End bp | 2452848 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637711083 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_316136 |
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| Protein GI | 74318396 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.336575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACG CGCTGATTGA TCGTTTCTGC GACCACCTGT GGCTGGAGGA CGGGCTCGCC
GAACTGACCC TGGCTGCGTA CCGGCGCGAC CTCAGAAGCT TTGCCGGGTG GCTGGACAAA
ACGCGCGCGC GCTCGCTCGA CGCGGTCGCG CCCGGAGATG TCGAAGCCTA TCTCGGGTGG
CGCTTCGCCC ACCACGTCGG GCCACGCAGC GCAGCGCGTT ATACCTCCGC GCTCAAGCGT
TTCTATCGTT ACCTGCTCCG CGAAAACCTA ATCGCCGCCG ACCCGACGCT GAACCTCGAC
CGCCCGAAAC TGCCGCGCGC GCTTCCCGCC AGCCTGAGCG AAACCGACGT CGAACGCCTG
CTCGAGCGCG CGGACAGCGA CACGCCGCAG GGCCTGCGCG ACCGGGCGAT GCTCGAGACG
CTATATGCTA CGGGGCTCAG GGTGTCCGAA CTCGTCGGCT TGAAGTTGAA CGCGCTCAAC
CTCGACGACG GTGTATTGCG CGTGACGGGC AAGGGCAACA AGGACCGGCT GGTGCCGCTC
GGTGAAGAGG CCGTGCGCCG GCTTCGGCAC TATCTCGCCG AGGCGCGCTC GCAGCTCCTG
CGCCGCCAGG TCTCCGACGC CGTGTTCGTC ACCCCTCGCG GCGCCGCGAT GACCCGGCAA
GCCTTCTGGT ACCTGATCAA GCGGCGCGCA GCGGCAGCCG GCGTCACGCG TCAGCTGTCG
CCGCACACGC TGCGCCACGC CTTCGCTACC CATCTTCTCA ATCACGGTGC CGACCTGCGC
GTCGTGCAGA TGTTGCTCGG ACACAGCGAC ATCTCGACCA CTCAGATCTA CACCCACGTC
GCGCGCGAGC GGATGAAGCG CCTGCACGCC GCGCACCATC CGCGCGGCTA G
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| Protein sequence | MNDALIDRFC DHLWLEDGLA ELTLAAYRRD LRSFAGWLDK TRARSLDAVA PGDVEAYLGW
RFAHHVGPRS AARYTSALKR FYRYLLRENL IAADPTLNLD RPKLPRALPA SLSETDVERL
LERADSDTPQ GLRDRAMLET LYATGLRVSE LVGLKLNALN LDDGVLRVTG KGNKDRLVPL
GEEAVRRLRH YLAEARSQLL RRQVSDAVFV TPRGAAMTRQ AFWYLIKRRA AAAGVTRQLS
PHTLRHAFAT HLLNHGADLR VVQMLLGHSD ISTTQIYTHV ARERMKRLHA AHHPRG
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