| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2368 |
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| Symbol | |
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| ID | 3671861 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2441941 |
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| End bp | 2442792 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637711073 |
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| Product | type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A |
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| Protein accession | YP_316126 |
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| Protein GI | 74318386 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.66665 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.125964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTAT TCGTCGCCGA ACCGGCCCTC TTCACAGGGC TGGTTTTCCT GCTCGGCCTG
CTCGTCGGCA GCTTTCTCAA CGTCGTCGTC CACCGCCTGC CGAAAATGAT GGACGCCGAA
TGGCAGGCGC AGTGCGCGGA GCTGCGCGGC GAGCCGTCGC CGGCGGGGCC GCGTTTCAAC
CTGTGGGCGC CGCGCTCGGC GTGCCCGGCC TGCGGCCACG CGATCACGGC GCTCGAGAAC
GTACCGCTGC TTTCGTGGCT ATGGCTTCGC GGACGGTGCG CGTCTTGCAG GACGCCGATC
AGCGCGCGCT ATCCGCTGGT CGAACTGCTC GCGGCGCTGC TCTCCGCGGC GGTGGCCTGG
AAGTGGGGGC CGACGGTCCA GGCCGCCGGT GCATTGCTGC TCGTCTGGAT GCTCATCGCG
CTCGCCTTCA TCGATCTTGA CACGACGTTG TTGCCGGACA GCCTGACGCT TCCACTGCTC
TGGGCCGGCT TGCTGATCAA TCTCGGCGGA CATTTCGCTT CCCTTCCTGA CGCGGTCGCC
GGCGCGGCCG CGGGCTACCT CGTGCTATGG TCGGTCTACT GGATGTTCAA GCTGGTGACG
GGCAAGGAGG GGATGGGCTA TGGTGATTTC AAGCTGCTGG CGGCGATCGG GGCGTGGCTC
GGCTGGCAGT TGCTGCCCGT CACGCTTCTG CTCGCGTCGG TCGTCGGGGC GGTGGTCGGC
ATCACGATGA TCGTCGCCGT CAAGCACGAC CGCCGTGTGC CGATCCCGTT CGGCCCCTAC
CTCGCGGGCG GGGGACTCGT TGCCCTGTTC TTCGGTGCGG ACCTGACGCA GGCCTATCTC
GCGCAGTTCT GA
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| Protein sequence | MTLFVAEPAL FTGLVFLLGL LVGSFLNVVV HRLPKMMDAE WQAQCAELRG EPSPAGPRFN
LWAPRSACPA CGHAITALEN VPLLSWLWLR GRCASCRTPI SARYPLVELL AALLSAAVAW
KWGPTVQAAG ALLLVWMLIA LAFIDLDTTL LPDSLTLPLL WAGLLINLGG HFASLPDAVA
GAAAGYLVLW SVYWMFKLVT GKEGMGYGDF KLLAAIGAWL GWQLLPVTLL LASVVGAVVG
ITMIVAVKHD RRVPIPFGPY LAGGGLVALF FGADLTQAYL AQF
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