| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2363 |
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| Symbol | |
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| ID | 3671581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2438064 |
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| End bp | 2439581 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637711068 |
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| Product | L-threonine ammonia-lyase |
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| Protein accession | YP_316121 |
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| Protein GI | 74318381 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.088118 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACC CAGACGACTA CCTCGAACGC ATTCTCACCT CGCGCGTCTA TGACGTCGCG
ATCGAATCGC CGCTCGAGGT CGCGCACAAT CTTTCGCGTC GCCTCGACAA CCAGATCCTG
CTCAAGCGCG AGGACCTGCA GCCGGTGTTC TCGTTCAAGT GCCGCGGCGC GTACAACAAG
ATGGCGAAGT TGACCGCCGC GCAACTGGCG CGCGGCGTCG TCGCGGCGTC CGCCGGCAAC
CACGCGCAGG GCGTCGCTTT GGCGGCCGAA AAGCTCGGCG CGACGGCCAC CATCGTCATG
CCGGCGACGA CCCCGAGGAT CAAGGTCGAC GCGGTCGCGG CGCGCGGCGC CCGCGTGATC
CTGCACGGCG ACAACTACGA CGAAGCCTAC GAGCATGCGA TGCAGCTGGC GAAGGAGGCG
AAGGCGACCT TCGTCCATCC CTACGACGAT CCCGACGTGA TCGCGGGCCA GGGCACGGTC
GCGATGGAGT TGCTGCGCCA GCACCCGGGC CCGATCCACT CCGTCTACAT CCCGGTCGGG
GGCGGCGGTC TGATCGCGGG TATGGCCGCC TACATCAAGC GGCTGCGGCC GCAGATCAAG
ATCGTCGGCG TCGAGCCCGA GGACGCCGAC GCGATGGCGC GTTCGCTGTG CAAGAACACG
CGCGTGACGC TGCCGCGCGT CGGCATTTTT GCCGACGGCG TCGCGGTAAA AAAGGTCGGC
AAGGAAACCT TCCGGCTGGC GCAGCTCTAT GTCGACGAAA TCATCCGCGT GAACAACGAC
GCGATCTGCG CAGCGATCAA GGACGTCTTC GAGGACACCC GTTCGATCCT CGAACCCGCG
GGCGCGCTTT CGATCGCCGG CATGAAAGCG GCGATCGCCG GTGACAGGCT GAAGGGGAAG
ACGCTTGCCG CCGTGGCGTC TGGCGCCAAC ATGAACTTCG ACCGCCTGCG CCATATTGCG
GAGCGCGCGG AACTGGGCGA GAAGCGCGAA GCGATTCTCG CGGTGACCAT TCCCGAAACG
CCGGGCAGCT TCAAGACCTT CTGCGGCCTG CTCGGCGCGC GCAACATCAC CGAATTCAAC
TATCGCTACG CCGATCCGCG TGTGGCGCGG GTGTTCGTCG GACTGTCCGT ACCCGGTGAG
GGCGAGAGCA AGCGCGTCGT CGAACTGCTC GGGCGGCACG GCCTCGAAGC GATCGATCTG
AGCGACAACG AAATGGCCAA GCTCCACATC CGCCACCTGG TCGGCGGGCG CGCGCCCGAC
GCGGTGAACG AGGTGCTGTA CCGCTTCGAG TTTCCCGAGC GCCCGGGCGC GCTGATGCAG
TTCCTGCAAA GCATGAGCCG CGGCTGGAAC ATCAGCCTCT TTCATTATCG CAACCACGGC
ACCGACTACG GGCGCGTGCT GGTCGGCATC CAGGTGCCGG ACAAGGAAAA ACCGGTCTTT
CAGAAATTCC TCGAAGGCCT CGGCTACCGC TACTGGGACG AGTCGCGCAA CCCGGCGTAC
ACGCTCTTCC TGGGCTGA
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| Protein sequence | MSHPDDYLER ILTSRVYDVA IESPLEVAHN LSRRLDNQIL LKREDLQPVF SFKCRGAYNK
MAKLTAAQLA RGVVAASAGN HAQGVALAAE KLGATATIVM PATTPRIKVD AVAARGARVI
LHGDNYDEAY EHAMQLAKEA KATFVHPYDD PDVIAGQGTV AMELLRQHPG PIHSVYIPVG
GGGLIAGMAA YIKRLRPQIK IVGVEPEDAD AMARSLCKNT RVTLPRVGIF ADGVAVKKVG
KETFRLAQLY VDEIIRVNND AICAAIKDVF EDTRSILEPA GALSIAGMKA AIAGDRLKGK
TLAAVASGAN MNFDRLRHIA ERAELGEKRE AILAVTIPET PGSFKTFCGL LGARNITEFN
YRYADPRVAR VFVGLSVPGE GESKRVVELL GRHGLEAIDL SDNEMAKLHI RHLVGGRAPD
AVNEVLYRFE FPERPGALMQ FLQSMSRGWN ISLFHYRNHG TDYGRVLVGI QVPDKEKPVF
QKFLEGLGYR YWDESRNPAY TLFLG
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