Gene Tbd_2360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2360 
Symbol 
ID3671578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2433239 
End bp2434867 
Gene Length1629 bp 
Protein Length542 aa 
Translation table11 
GC content68% 
IMG OID637711065 
Productmetal dependent phosphohydrolase 
Protein accessionYP_316118 
Protein GI74318378 
COG category[J] Translation, ribosomal structure and biogenesis
[S] Function unknown 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG1371] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.461963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCT ACGTCGTCGG CGGCGCGGTG CGCGACCGCT TGCTGGGCCT GCAGGTCAGC 
GACCGCGACC ACGTCGTCGT CGGCGCCACC CCCGACGAGA TGCTGGCGGC GGGCTTTCGG
CCGGTCGGCA AGGACTTCCC TGTCTTCCTT CATCCGCACA CCCACGAGGA GTATGCGCTC
GCGCGCACCG AGCGCAAATC CGGCCGCGGC TACAAGGGCT TCGTCGTGCA TGCGGCGCCC
GAGGTCACCC TCGAAGAGGA CTTGGCGCGG CGCGACCTCA CGATCAACGC GATCGCCGAG
GACGAAAGTG GGACCCTGAT CGACCCCTAC GATGGCCAGG CGGACCTCGC GGCGAAGACC
TTCCGCCACG TCAGCGAGGC CTTCGCCGAG GATCCGGTCC GCATCCTGCG CGTCGCGCGC
TTCGCCGCGC GCTTCACCGA ATTCACCGTC GCCCCGGAAA CCAATGCCTT GATGCGGCGC
ATGGTCGACA GCGGCGAAGT CGACGCACTG GTCGCCGAAC GCGTCTGGCA GGAGATCGCC
CGCGGCCTCA TGGAGACGCA GCCGTCGCGC ATGTTCGCGG TGCTGCGCGA CTGCGGCGCG
CTCGCCCGGA TGCTTCCCGA AGTCGACCGC CTGTTCGGCG TGCCGCAGCC GCCCGAGCAT
CATCCCGAGG TCGACACGGG GATCCACGTC ATGCTCGTGA TCGACTGGGC GGCGCGGCAG
GGCGCGAACC TGGCCGTGCG CTTCGCGGCC CTGACCCACG ACCTCGGCAA GGGCGAGACC
TCGCCCGAAT TGTGGCCCAG GCACCACGGC CACGAAGGCG CGAGCGTGAG ACTCGTGCGC
GCGCTGAGCG AGCGCCTGCG CGCACCCGCC GAGTGCCGCG AACTCGCGGT CGCGGTAGCG
CGCGATCATG GCAACGTACA TCGTGCGCTC GAATTGCGAC CGCGCACGAT CGTCGAACTG
CTCGAACGCG TCGATGCCTT CCGCCGCCCC GAACGCTTCG AACATTTTCT GGAAGCCTGT
GAATGTGATT TCCGCGGGCG GCCCGGCTAC GCGGACAAGA CTTACCCGCC GCCGCAATAC
CTGCGGCAGG CGTTGCACAC GGCGCAGCAG ATCGACGCGG CTGCGGTCGC GCGCAGCGTT
GAGTCGGTGA GAATTCGTGA AGCGATACTC GCGGCGCGCG TGGAGGCAGT GAACCGGTGG
CGGCGCAGTC GCGCGAGCCG CTGGGAACAG TTCTCGCATG AAGCCGACAT CGGTGTGCGC
GGCATCGGCC CCGATCTGGC GGCCGCCTTC GAGCAGGTGG CCGTCGCGAT GACGGCGGTG
ATTACCGACC CCGCGCGGGT CGCGACGGAA ACCTGCGTCG AGATACGCTG CGACGCCGCT
GACGACGAGC TTCTGCTCGT CGACTGGCTC AACGCGCTGA TCTACGAAAT GGCGGTTCGC
CATATGCTCT TCGGCCGTTT CGAGGTGCAC CTCGACCGCC GCCGTTTGTA CGCGAAAGCC
TGGGGCGAGG CCGTCGACGC GCCCAGGCAT CAACCCGTCG TCGAGATCAA GGGCGCGACC
TATACTGGCC TGAAGGTAGG GAGAGACGAA ACCGGGCAAT GGCAGGCCCA GTGCATCGTG
GACGTGTGA
 
Protein sequence
MKTYVVGGAV RDRLLGLQVS DRDHVVVGAT PDEMLAAGFR PVGKDFPVFL HPHTHEEYAL 
ARTERKSGRG YKGFVVHAAP EVTLEEDLAR RDLTINAIAE DESGTLIDPY DGQADLAAKT
FRHVSEAFAE DPVRILRVAR FAARFTEFTV APETNALMRR MVDSGEVDAL VAERVWQEIA
RGLMETQPSR MFAVLRDCGA LARMLPEVDR LFGVPQPPEH HPEVDTGIHV MLVIDWAARQ
GANLAVRFAA LTHDLGKGET SPELWPRHHG HEGASVRLVR ALSERLRAPA ECRELAVAVA
RDHGNVHRAL ELRPRTIVEL LERVDAFRRP ERFEHFLEAC ECDFRGRPGY ADKTYPPPQY
LRQALHTAQQ IDAAAVARSV ESVRIREAIL AARVEAVNRW RRSRASRWEQ FSHEADIGVR
GIGPDLAAAF EQVAVAMTAV ITDPARVATE TCVEIRCDAA DDELLLVDWL NALIYEMAVR
HMLFGRFEVH LDRRRLYAKA WGEAVDAPRH QPVVEIKGAT YTGLKVGRDE TGQWQAQCIV
DV