Gene Tbd_2356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2356 
Symbol 
ID3671574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2429992 
End bp2430564 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content70% 
IMG OID637711061 
Productputative outer membrane lipoprotein 
Protein accessionYP_316114 
Protein GI74318374 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.662558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.584957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGCAC GCATCCCCAC CCTGCTCGCG ATCCTGCTCG CTGCAAGCGG CAGCGCCTAC 
GCCGGGCATG GCCCCGGCGA CGGCTTCACG ACCCGCGCCC GCGTCGTGTC GAGCGTTCCG
ATCTACGAGA GCATCAGCGA GCCGCGCCGC GAGTGCTGGA CCGAAACGGT CGGCTACGAG
ACGCGCAGCT ATCGCGAAGG CAACGGCGGC GGCAGCGCGA TCATCGGCGC AATCGCCGGC
GGCCTGCTCG GCTCGACCGT CGGCAAGGGC GACGGGCGCG TCGCCGCGGC CGCGGTCGGC
GCGGCGACCG GCGCAGTCGT CGGCGACCGC TGGAACCGCC CCGAGACGCG TTACGAATCG
GTTCCCCAGG AGGTCGAACG CTGTCGCACC CGCTACGAGC ATCGCGAGGT CATCGTCGGC
TACGACGTGC GCTACCGCTT CCGCGGCCGC GAGTACAGCA CGCGGCTCGA TCACGATCCG
GGCAAATGGG TCCGGCTCGA CGTCGATTTC AACGTCGCCG AAGGAAGCCG GTACACGCAC
CGGCCGAACG ACTACGACCA CTGGGGCGAC TGA
 
Protein sequence
MTARIPTLLA ILLAASGSAY AGHGPGDGFT TRARVVSSVP IYESISEPRR ECWTETVGYE 
TRSYREGNGG GSAIIGAIAG GLLGSTVGKG DGRVAAAAVG AATGAVVGDR WNRPETRYES
VPQEVERCRT RYEHREVIVG YDVRYRFRGR EYSTRLDHDP GKWVRLDVDF NVAEGSRYTH
RPNDYDHWGD