Gene Tbd_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2345 
Symbol 
ID3673473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2418791 
End bp2419513 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content68% 
IMG OID637711050 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_316103 
Protein GI74318363 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.422159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCG TCCGCTCGCT GGTCTTCGCG GTCCTGCAGA CCGCGCTGAC AATCCTTTTC 
AGTCTGGTCG CCTTGCTGTC CTTCCCGTTT TCGGCGCACG CGCGCTATCG CCTGATCACG
GGCTACAACC ACACCGTGAT CTGGCTCGCA CGCTGGGTGC TCGGCATCCG CTACGTCGTC
GAGGGGCGCG AGCATCTGCC GGCCGAGCCC GCGGTCATTC TCGCCAAGCA CCAGTCGGCA
TGGGAGACCG TGGCCTTCCT GTTCCTGTTT CCGCCGGTCT CGCCGGTGAT CAAGCAGGAA
CTGCTCAAAG TGCCGTTCTT CGGCTGGGCC TTCCGCATGC TCTCGCCGAT CGCGATCGAT
CGCGCCGCCG GGCGCGAGGC GCTCAAGCAG ATCGTCAGGC AAGGCAAGGA CAAGCTCGCG
CAGGGATTCT GGGTACTCGT GTTTCCCGAG GGCACCCGCG TCGCGCCCGG CGAGAAGGGC
CGCTACGGCA TCGGCGGCGC GTGGCTCGCG GCGGAATCGG GCGCCCCGGT GGTGCCGGTC
GCGCACAACG CCGGCGAGGT GTGGCCGAAG AACGCCTTCG TCAAGCATCC GGGGACGATC
ACGGTGCGCA TCGGCCCCGC GATCGACAGC CGCGAGAAAA GCGCCGCCGA ACTCACCCGG
GCGGTCGAAG CCTGGATCGA AGCGGAAATG GGGAGGCTGC CGCCTGCTGC CGCACGCCAA
TAG
 
Protein sequence
MSLVRSLVFA VLQTALTILF SLVALLSFPF SAHARYRLIT GYNHTVIWLA RWVLGIRYVV 
EGREHLPAEP AVILAKHQSA WETVAFLFLF PPVSPVIKQE LLKVPFFGWA FRMLSPIAID
RAAGREALKQ IVRQGKDKLA QGFWVLVFPE GTRVAPGEKG RYGIGGAWLA AESGAPVVPV
AHNAGEVWPK NAFVKHPGTI TVRIGPAIDS REKSAAELTR AVEAWIEAEM GRLPPAAARQ