Gene Tbd_2337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2337 
Symbol 
ID3673465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2410789 
End bp2412975 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content65% 
IMG OID637711042 
Productorganic solvent tolerance transmembrane protein 
Protein accessionYP_316095 
Protein GI74318355 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.503681 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.440955 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCCGCCT TGCCCGGTTT CACGCTCGCT GCGCTGTTGC TGAACGTCTC CCTCGCGGAG 
GCGAACGGGC TCGTGCTGAA GAAGGACCTC GAACTGAAGG GTTCGACCGT TGCCGGGAAG
GAGGCGCCGC TCTTCCTCAC CGCCGACCGG ATCGACTCGA CGGCCGTGGG CATCATCGAA
GCGGCCGGCC GCGTCGAGGC ACGCCAGGCC GGGCGCAACT TCTTCGCCGA CTGGCTGCGC
TACGACACCC GCGAGAACAG CGTCCAGGCG CGCGGCAAGG TCCGGCTCGA ACAGCCGGCC
CTGCTCGTGA CCGGCGACTC GCTGGACATC GATCTCGATA CCTACAGCGG ACAGCTCGCC
GCACCCGTCT ACCGCTTCGT CGGCCAGCCG GGACGCGGCG ACGCCGAGCG CATCGACTTC
ATCGACGAAA ACAATTTCAG CCTGGCCGAC GCGACCTATA CGACCTGCTC GGTCGAGGAC
GAGGACTGGT ACCTCAAGAT CGCCGACCTC GACATCGACC GCGGCCGCGA CGTCGGCACC
GCCCACCACG CGTCGCTGCG CTTTCTCGGC GTACCGATCC TGTATACGCC GTGGATGAGT
TTTCCGCTCG GCGACGCGCG CAAGAGCGGC ATCCTCGCGC CGACGATCGG CACGACCGAA
CGCAGCGGCC TCGACATCGT CGTGCCGTAT TACCTCAACC TCGCGCCCAA CTACGACGCT
ACGCTCTACC CCCGTCTGCT GTCGAAGCGC GGCGTGCAGC TCGGCGGCGA ATTTCGCTAT
CTGCTCGAAG ACGCCCGGGG CGTGAACCGT GTCGAATACC TCGACGACAG CGAGGCCGCG
CGGACGCGCT GGAGCGTCGC GCTCAACAAC AGCTATCGGC TGAACGCGAA CACCCAGGCC
GGCATGCTGT TCGACCGCGT GTCCGACGAC GACTATTTCC GTGACCTCTC CAACCTGATC
TCGATCACGT CGCTCAGCCA CCTCAACCGC GAGGTATGGG TGACGACGCA GCATGCCCAC
TGGAACGCCG AGCTGCGCGC ACAGAGCTTC CAGACCCTGC AGGACTCGAC CGCGTCGACG
CCGATCGCCG AGCCCTATGC GCGCCTGCCG CACGCCCGTC TCGGTGCGGC CCAGACCTTC
GGCCGATTCG AGTTCACGCT TGAAAGCGAA GCGACGCGCT TCGCCCATCC GACGAAGACC
GAGGGAACGC GCGTCCTCGC CTACCCGACG CTGCGCATGC CGCTCGTCAA CGATTACGGC
TTCCTCACCC CGCAGATCGG CTGGCACAGC ACCTATTACG CGCTCGACGA GAGTGCGGCC
GACGACAATA TCGTGCGCAA CCTGCCGATC TTCAGCCTCG ACAGCGGCGT CGTGTTCGAC
CGGCCGATGC GCTTTTCGGG CGTCGATTTC GAACAAACGC TCGAACCGCG CGTCTACTAC
GTCTACGCGC CCTATCGCGA TCAGGACGAC ATTCCGATCT TCGACACCGG GCTGCTCGAT
TTCAGCTACG CGCAGATGTT CACGCCGAAC CAGTTCATCG GCGGCGACCG CATCAACGAC
GCGAACCAGC TGACCGTCGC CGTGACGAGC CGTTTCGTCG AGGCCGAAAG CGGGCTCGAG
CGCCTGCAGG TCACGCTCGG CCAGCGCTAC TACTTCACGC CCCAGCGCGT CACGCTGCCC
GGCGTCGACC CCCGGAGTGA CAACACGACC GACCTGCTCG CGGCCGTGAG CGGACAGATC
ACGCGAGACT GGCGCATCGA CACGGCCTGG CAGTTCGACA CCCAGAACGG CACGGTCATC
CGCCAGAACC TCGGCGCGTC CTACCGTCCG GGCCCCGGCC GCGCGATCAA CTTCGGCTAT
CGCTTCATCG ACCAGACCAC CGAGCAGGTC GACGTGTCCG CGCAGTGGCC CCTGGGCAGG
CGCTGGTACG GCATGTTCCG CTACAACTAC TCCTTCCAGG ACGACAAGCT CGTCGAAGGG
CTTGCCGGCC TTGAATACAA TGGCGGCTGC TGGGCGCTGC GCACCGTATT CCAGCGCCTT
GCCACGAAGG AAGACCAGTC GACCGACGCG CTGTTCTTCC AGCTCGAGCT CAACGGCATG
GGCCGCCTCG GCTCCAACCC GCTCGACGTT TTGAAACAAA GTGTTCCCGG ATACAGGCCA
AGCAATGAAA TTCTTCCAAC GCCCTGA
 
Protein sequence
MSALPGFTLA ALLLNVSLAE ANGLVLKKDL ELKGSTVAGK EAPLFLTADR IDSTAVGIIE 
AAGRVEARQA GRNFFADWLR YDTRENSVQA RGKVRLEQPA LLVTGDSLDI DLDTYSGQLA
APVYRFVGQP GRGDAERIDF IDENNFSLAD ATYTTCSVED EDWYLKIADL DIDRGRDVGT
AHHASLRFLG VPILYTPWMS FPLGDARKSG ILAPTIGTTE RSGLDIVVPY YLNLAPNYDA
TLYPRLLSKR GVQLGGEFRY LLEDARGVNR VEYLDDSEAA RTRWSVALNN SYRLNANTQA
GMLFDRVSDD DYFRDLSNLI SITSLSHLNR EVWVTTQHAH WNAELRAQSF QTLQDSTAST
PIAEPYARLP HARLGAAQTF GRFEFTLESE ATRFAHPTKT EGTRVLAYPT LRMPLVNDYG
FLTPQIGWHS TYYALDESAA DDNIVRNLPI FSLDSGVVFD RPMRFSGVDF EQTLEPRVYY
VYAPYRDQDD IPIFDTGLLD FSYAQMFTPN QFIGGDRIND ANQLTVAVTS RFVEAESGLE
RLQVTLGQRY YFTPQRVTLP GVDPRSDNTT DLLAAVSGQI TRDWRIDTAW QFDTQNGTVI
RQNLGASYRP GPGRAINFGY RFIDQTTEQV DVSAQWPLGR RWYGMFRYNY SFQDDKLVEG
LAGLEYNGGC WALRTVFQRL ATKEDQSTDA LFFQLELNGM GRLGSNPLDV LKQSVPGYRP
SNEILPTP