| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2206 |
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| Symbol | tolB |
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| ID | 3671597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2285905 |
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| End bp | 2287188 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637710911 |
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| Product | translocation protein TolB |
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| Protein accession | YP_315964 |
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| Protein GI | 74318224 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00281817 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTGTAT CCCTGTTGCG TGCCCTCCTG GTTTTTTCCC TGCTGTGCCT GGGTCTGAGC
GCCACGCGCG CTGCTCACGC CGCGATGGAG ATCGAAGTCG TCGGCGGTGC CGCGAACAAG
ATCGCGATCG CGATGGTGCC CTTCCAGACC GCTGCGGGTC AGCCTTCGCC GCCGCTCACG
CAGATCGTCG CCGACGATCT CGCGCGCAGC GGACAGTTCA GCATGACCGA CGTCACCGGT
GCGGCGCAGC CGGTCGAGCC GTCCCAGGTG GACTATGCGG CGTGGCGGAC CAAGGGCGCG
GAAGCGATGG TCATCGGGCA GGTCGTCGCG CTGGGCGGCG GGCGTTTCGA AGTACGCTTC
AGATTGCTCG ACGTCGTCAA GGGCACGCAA CTCGCAGGCT ATAGCTACAA GATCACGGCG
GCGCAGTGGC GCGCCACGGG CCATCGAATC GCCGATGTCG TGTACGAAAA ATTGACCGGC
ATCCCCGGCG CGTTCAGCAG CCGCATCGCC TACGTGCAGA AGCAGGGCAA GCGTTACGAA
CTGCGCGTCG CCGACGCCGA CGGGCAGAAT CCGCGCACGA TCGTGCGTTC GCTCGAGCCC
TTGATTTCGC CGATGTTTTC GCCCGACGGC ACGCGTCTCG CCTACGTGTC CTTCGAGGAC
AAGAAGCCCG TGGTGTACGT GCAGTCGCTG CAGCAGGGCG GACGGCGCAA GGTCGCCGCG
TTCAAGGGTT CCAATTCGGC GCCGGCCTGG TCGCCCGACG GCCGGCAGCT CGCGGTCGTG
CTGACCCGCG ACGGGGCGTC GCAGATCTAC CTGATCAACG TCGACGGCAG CGGCCTCACA
CGTCTCATGC GAAGCGGCGA CATCGACACC GAACCGGTAT TCTCGCCGGA CGGGCAGACG
CTTTATTTCA CGTCCGATCG CGGGGGCAGT CCGCAGATTT ACCGCGTCGC GAAAAGCGGC
GGCGACGCGA AGCGGGTGAG CTTCGAGGGC AGTTACAATG TTTCGCCGAC GATCAGCCCG
GACGGACGCT ATCTTGCATA CATCAGCCGC GACGGCGGGC GCTTTCGCGT CGTGCTGCAG
GAACTTGCCT CCGGACAGAC GCGTGTGCTG ACCGAAACGA CGCGCGACGA GGCGCCGAGC
TTCGCGCCGA ACGGGCAGGC CGTGCTGTAC GCGACGGTGC AGGGCGGACG CGGCGTGCTC
GGAACCGTCA CCCTCGACGG CAAAACGCGC GCCCGCCTCT CGGAATCCGG CGTCGACGCG
CGCGAGCCTG CGTGGGGGCC GTAG
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| Protein sequence | MPVSLLRALL VFSLLCLGLS ATRAAHAAME IEVVGGAANK IAIAMVPFQT AAGQPSPPLT
QIVADDLARS GQFSMTDVTG AAQPVEPSQV DYAAWRTKGA EAMVIGQVVA LGGGRFEVRF
RLLDVVKGTQ LAGYSYKITA AQWRATGHRI ADVVYEKLTG IPGAFSSRIA YVQKQGKRYE
LRVADADGQN PRTIVRSLEP LISPMFSPDG TRLAYVSFED KKPVVYVQSL QQGGRRKVAA
FKGSNSAPAW SPDGRQLAVV LTRDGASQIY LINVDGSGLT RLMRSGDIDT EPVFSPDGQT
LYFTSDRGGS PQIYRVAKSG GDAKRVSFEG SYNVSPTISP DGRYLAYISR DGGRFRVVLQ
ELASGQTRVL TETTRDEAPS FAPNGQAVLY ATVQGGRGVL GTVTLDGKTR ARLSESGVDA
REPAWGP
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