| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2193 |
|---|
| Symbol | |
|---|
| ID | 3671974 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thiobacillus denitrificans ATCC 25259 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007404 |
|---|
| Strand | + |
|---|
| Start bp | 2274192 |
|---|
| End bp | 2275145 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637710897 |
|---|
| Product | thiamine-monophosphate kinase |
|---|
| Protein accession | YP_315951 |
|---|
| Protein GI | 74318211 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0611] Thiamine monophosphate kinase |
|---|
| TIGRFAM ID | [TIGR01379] thiamine-monophosphate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00454297 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000617808 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAATTCG ACCTCATCGC GCGCCACTTC ACCCGCCCCA CCCCGGGCGC GGTGCTCGGC
GTCGGCGATG ACTGCGCGCT CGTCGCGCCG ACGTCGGGCA TGCAGCTCGC GGTGTCCTCC
GACATGCTGC TCGAGGGCCG GCATTTCGCG CCGCAGGACA GTCCCGCCGG GATCGGCCAC
AAGTCGCTCG CCGTCAATCT GTCTGACCTC GCGGCGATGG GCGCAAGCCC GCGCTGGGCG
ACGCTGGCCA TCGCGCTTCC GGCCGACGAC GACGCCTGGC TCAAGGCCTT CGCGCGCGGA
TTTTTTCGCA TGGCCGATGC GCACGGCATC GAACTCGTCG GCGGCGACAC GACTCGCGGC
GCGCTCACGA TCAGCATCAC GGTGATCGGT GAACTGCCGC CGGGCGAGGC CTTGCGCCGC
GACGGCGCGA GGCCCGGCGA CGACGTGTGG GTGTCAGGCG TCATCGGCTC GGCCGCCACC
GCACTCGCGT ATCGCCAGGG CCGCCTCTTC ATGGAACAGA TCGACGCCGC CAAGGTCTTG
CCGGCGCTCT ATCTGCCGAC ACCACGGGTC GCGCTCGGCA TCGCGCTGCG TGGCGTCGCC
GCGAGCGCGA TCGACATCTC GGACGGACTG CTCGCCGACC TCGGCCATAT CCTCGAACGC
TCGGCGGTCG GCGCGGTCGT CGATCTCGCC GCCCTGCCCA CGCTGCCGGT GCTGCAGCGC
TATCTGCACG AATCGGTTGC GCGCGACTGC ATCCTCGCCG GCGGCGACGA CTATGAATTG
TGCTTCACGG CGCCCGCGGC GCGGCGCGAT GCGGTGCTCG AAGCCGCCGC CCGCGCCGAC
ACCCCGGTGA CCCGCGTCGG CCGTATCACC GCCGACCCCG GCCTGCAGGT CGTCGGCGCC
GACGGCCATG CCCTCGCCAT CACCCGCACG GGCTACGACC ATTTTGCGGC CTGA
|
|---|
| Protein sequence | MEFDLIARHF TRPTPGAVLG VGDDCALVAP TSGMQLAVSS DMLLEGRHFA PQDSPAGIGH
KSLAVNLSDL AAMGASPRWA TLAIALPADD DAWLKAFARG FFRMADAHGI ELVGGDTTRG
ALTISITVIG ELPPGEALRR DGARPGDDVW VSGVIGSAAT ALAYRQGRLF MEQIDAAKVL
PALYLPTPRV ALGIALRGVA ASAIDISDGL LADLGHILER SAVGAVVDLA ALPTLPVLQR
YLHESVARDC ILAGGDDYEL CFTAPAARRD AVLEAAARAD TPVTRVGRIT ADPGLQVVGA
DGHALAITRT GYDHFAA
|
|---|
| |