| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2191 |
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| Symbol | ribH |
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| ID | 3671972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | + |
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| Start bp | 2273180 |
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| End bp | 2273647 |
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| Gene Length | 468 bp |
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| Protein Length | 155 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637710895 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_315949 |
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| Protein GI | 74318209 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.204142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000492523 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGAACCA GCAGCGACAT TTTTGAGCTC GACCCGATCT ACCAGGGCAA GGGGCTCAGG
ATCGGCATCG TCATGAGCCG CTTCAACAAG GACATCTGCG AAGGCCTTCT GTCGGCCTGC
GAGACCGAGC TCGACCGTCT CGGGGTCGCA CGCGAGGACG TGCTGCTCGT CGACGTGCCC
GGCGCACTCG AACATCCGCT CGCGCTGCAG AAAATGGCGC AGTCCGCCCG CTACGACGCC
CTGATCGCGA TCGGCGCCGT CGTGCGCGGC GACACCTACC ATTTCGAGAT CGTGTCGAAC
GAGTCCTCGC GCGGCATCCT CGACGTCCAG CTCGAAACCG GCGTGCCGAT CGCCAACGCG
ATCCTCACCG TCGACACCGA GGAGCAGGCG CACGTGCGCA TGGCCGAAAA AGGCCGCGAC
GCCGCGCGCG TAGCGGTCGA GATGGCCAAC CTGCTGAAGC GTCTCTGA
|
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| Protein sequence | MGTSSDIFEL DPIYQGKGLR IGIVMSRFNK DICEGLLSAC ETELDRLGVA REDVLLVDVP
GALEHPLALQ KMAQSARYDA LIAIGAVVRG DTYHFEIVSN ESSRGILDVQ LETGVPIANA
ILTVDTEEQA HVRMAEKGRD AARVAVEMAN LLKRL
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