Gene Tbd_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTbd_2187 
Symbol 
ID3671968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThiobacillus denitrificans ATCC 25259 
KingdomBacteria 
Replicon accessionNC_007404 
Strand
Start bp2269149 
End bp2270099 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content69% 
IMG OID637710891 
Producthypothetical protein 
Protein accessionYP_315945 
Protein GI74318205 
COG category[R] General function prediction only 
COG ID[COG1242] Predicted Fe-S oxidoreductase 
TIGRFAM ID[TIGR01212] radical SAM protein, TIGR01212 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000345504 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCATGC TCAGCGAACG CGTGCATACC TTCGGCCGAG CGATGCTCGA CCGCTATGGG 
GAGCGCGTGC ACAAGATCGC GCTCGACGCC GGCTTCACCT GCCCGAACCG CGACGGCAGC
AAGGGCATCG GCGGCTGCAC CTTCTGCAAC AACAAGTCCT TCGCGCCCGG CGCGCGCGAG
CCTGCTTCGC TCGTCGCGCA ATTTGACCGC GCGCGCGGGC GCATCGGGCG GGCGACCGGG
GCACGCCGCT TCATCGCCTA CTTCCAGGCC TACACGAACA CCTACGCTCA CGTCGACGAA
CTCCGCGCGC TCTACGATTC GGCGCTCGCC GCGCCCGACG TCGTCGGCCT CGCCATCGGC
ACGCGCCCCG ACTGCGTCCC GCCGCCGGTG CTCGCGCTGC TCGCCGAATA CCGCGACCGC
GGGCACGAGG TCTGGCTTGA GCTCGGCCTG CAGTCGAGCT TCGACGCGAC GCTTGCGCGG
GTCAATCGCG GACATGGCTT CGCCGAATAC CGCACGGCGA CGCGCGCGGC GCGCGCGCTG
GGCATCCCGG TGTGCTGCCA CCTGATCGTC GGCCTGCCCG GCGAGGACGA ATCGCACAGC
CACGTCAGTC TCGACCGCGT GCTCGACATC GGCGTCGACG GTCTCAAGCT GCACCCGCTG
CACGTAGTCA AGCACACCAA GCTTGCGATC GAGTGGAAAC GCGGCGAATA CCAGCCGCTC
GACGAAGCCG ACTACACGCG CATCGCCGCC GACCTGATCG AGCGCACGCC GTGGGACGTG
GTCTATCACC GCGTTACCGG CACGGCGTCG CCCGACATCC TGCTCGCGCC GGCATGGTGC
GCCAAGAAAT GGGACGTATT GAACGGCATC GCCGACGAAC TGCTGCGCCG TGGCACGCGG
CAAGGTTCGC GCGCGGCCGA GCACTGGAAG GAGACGCATC ATGCCGCTTG A
 
Protein sequence
MSMLSERVHT FGRAMLDRYG ERVHKIALDA GFTCPNRDGS KGIGGCTFCN NKSFAPGARE 
PASLVAQFDR ARGRIGRATG ARRFIAYFQA YTNTYAHVDE LRALYDSALA APDVVGLAIG
TRPDCVPPPV LALLAEYRDR GHEVWLELGL QSSFDATLAR VNRGHGFAEY RTATRAARAL
GIPVCCHLIV GLPGEDESHS HVSLDRVLDI GVDGLKLHPL HVVKHTKLAI EWKRGEYQPL
DEADYTRIAA DLIERTPWDV VYHRVTGTAS PDILLAPAWC AKKWDVLNGI ADELLRRGTR
QGSRAAEHWK ETHHAA