| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2164 |
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| Symbol | |
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| ID | 3671945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2249008 |
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| End bp | 2250078 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637710868 |
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| Product | transporter, periplasmic component |
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| Protein accession | YP_315922 |
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| Protein GI | 74318182 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0458836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGAC GAGATTTCCT GAGCGGCGCC GCGGTCGCCG CCGTGCTGCC CGTGAGCGCA
CGGGCAGCGA CCGAGCCCGT CGTCCGCTGG CGCCTCGCGT CGAGCTTTCC GAAGAGCCTA
GACACGATCT ACGGCGCCGG GGAGACGCTG GCCAAGCGCG TCGCCGCGCT GACCGGCGGA
AAGTTCCAGA TCCGCGTCTT CGCCGGCGGC GAACTGGTGC CCGGCCTGCA GGTGCTCGAC
GCGGTCGGCA ACGGCACGGC CGAATGCGGC CATTCGGCGG GCTATTACTA CGTCGGCAAG
AACCTCGCGC TCGCGTTCGA CACGGCGGTG CCCTTCGGCC TCACGGCGCG CCAGCAGAAC
GCCTGGATGT ACGCGGGCGG CGGCATCGAG GCGCTGCGCA AGCTCTACGC CAAGTACAAG
GTCCTGCAGT TCCCGGGCGG CAACACCGGC ACCCAGATGG GCGGCTGGTT CAGGAAGCCG
ATCAAGTCGC TCGCCGATCT GCGCGGGCTC AAGATGCGCA TCCCGGGCAT CGGCGGCCAG
ATCATGGCGA AGCTCGGCGC CGTGCCGCAG ACCCTGCCCG GCGGCGACAT CTATCCTGCG
CTCGAACGCG GCGCGCTCGA CGCGGCCGAA TGGGTCGGGC CCTACGACGA CGAGAAGCTC
GGCTTCCACA AGATCGCGAA GCACTACTAC TACCCCGGCT GGTGGGAGGG CGGGCCGCAG
CTCTCGTTCT ACGTCAACCA GACGGCGTGG CAGGCTTTGC CAGAGCTGTA CCGACAGGCG
TTCGAGGCCG CGGCGGCCGA AGCCAACCAG CTCATGCTCG CGCAGTACGA CGCCAAGAAT
CCGCCAGCCT TGCTGCGGCT GGTCGGGCAG GGCGTCAAGC TTCATCCTTA CCCCAAGGAT
GTGATGCTCG CGGCGCGGCG CGCGACCTTC GAGCTCTACG AAGCCGAGGC GAAGACCAAC
GCCGACTTCG CCGCGATCTA CCGGCCGTGG AAGGCTTTCC GCGACACCGA ATTCCAGTGG
TTCAAGGTCA ACGAGGCGGC CTACGCCAAC TTCAACTACT ACGTGAAGTG A
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| Protein sequence | MQRRDFLSGA AVAAVLPVSA RAATEPVVRW RLASSFPKSL DTIYGAGETL AKRVAALTGG
KFQIRVFAGG ELVPGLQVLD AVGNGTAECG HSAGYYYVGK NLALAFDTAV PFGLTARQQN
AWMYAGGGIE ALRKLYAKYK VLQFPGGNTG TQMGGWFRKP IKSLADLRGL KMRIPGIGGQ
IMAKLGAVPQ TLPGGDIYPA LERGALDAAE WVGPYDDEKL GFHKIAKHYY YPGWWEGGPQ
LSFYVNQTAW QALPELYRQA FEAAAAEANQ LMLAQYDAKN PPALLRLVGQ GVKLHPYPKD
VMLAARRATF ELYEAEAKTN ADFAAIYRPW KAFRDTEFQW FKVNEAAYAN FNYYVK
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