Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2159 |
Symbol | |
ID | 3671940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | - |
Start bp | 2244620 |
End bp | 2246062 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637710863 |
Product | signal transduction protein |
Protein accession | YP_315917 |
Protein GI | 74318177 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3434] Predicted signal transduction protein containing EAL and modified HD-GYP domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.140137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.149553 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCGC TGACGGGCAG GGGCTCGATA CTGGATCGTC TGATCCGGGC GCTCGGCGGC ACGGGGCGGG TGCGCAAGGA GGTCGAGCGC AGCGGGCTCT TCGCGTCCCG AACGCAGGAG GCGGCGTTTC GCAAGCTGGA GGCGGCGGCG CCGCTCGTCA CCGAGGCGCA CCATGCGCCG GTTCCCGTCG TGACGCATTC GAGCACGCCG CTCGCGCTGA ACAGCCCGTC GATCGTGCGG CGGGAGGCGA TACTCGGGCG GAACACGCGG GTCGCCGGCT ACGTGTTCAG CCTGGTGTAC CAGGCCAATG CGCGGGTGCA GGCCTCCAGC GTCAGCGTGC AGCGCCTCTA TGATCAGGTG CTGCTGCGCA ATCTGCAGGC CATCGGGATC CGCCGTCTGC TCGAGCACCG CCTGGCTTTC ATCGACGTGT CGGCGAGTTC GCTCGAGACG CCTGTGGTCG AGGAAATGCC GGCGCAAGGC ACCGTCTACC TATTCGGCGC GAATGACGGT CTTGCCCGCC CGCATAACGC GACCCTCGCG CGCCTCAGGG CGAAGGGATA CCGCATCGGC TTGCGCAGTC GAGGGGCGAC CCCCATGCCG GGCCTGGATC AACTCGACTT CCTGCTGATC GACATCGCTG CCGGCGACCT GCCGTCCATC AGGGACCAGA TGCAGGCGGC CGTCGCGCGG GCGCCGAAGA TCCGCTTCGT CGCCGCCAAT GTGCAGACCC AGGAAGAATA CCGGGCCTGT GCGGGCCTGC CTTTCTCGTA TTACCAGGGC CCATTCATCA CGAGCCGCGA ACAGCTAGAC GGCCCCGTCG TCGATGCAGG GCGCGCGAGG ATCCTCGAGG TATTGAATGC GTTGCGCGGC GACGCCGAGG TGGGCGAGCT TGCGGCACTG ATCAAGCAGA ACCTCGCCCT GTCCTACAAG CTGCTGCGCT ACATCAATTC TCCCGGGATG GGGCTGAGTC GTACGATCGT CGCCCCGGAA CCGGCCTTGC TCGTGCTCGG ACGGCAGAAG CTGTATCGCT GGCTCGCCAT CCTGCTCTTC ACCAGCGGTA AGACGCCCGG GCTCGACTGG GCCGTCATGG AGAACGCCTT GGTCCGCGCC CGGCTCGCCG AGTTGCTCGC CGAGTGCACG GGTGACCTGA CGCCCGGCGA GCGCGACGAA CTGTTCGTCG CGGGCATGTT CTCGCTGCTG GATGTCGTTC TCTCCGCGCC GCTCGATGCG GTCCTGCAAA AGGTCAAGCT GCCTGCACCG GTCAGCGACG CCTTGCTCGA GCGCGAGGGG AAATACGCGC CCTATCTCGC CTTGGCGATC GCCTGCGAGG AGTCGGACGA CCTCAACATC GCGACGCTCG CGCAGGGCAT CGGCCTCGAC ATGTGGCGGG TCAACAGTTT TCACCTCGAC GCCATGCTCT GGGCACAGCA GATCGGGGAT TAG
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Protein sequence | MKSLTGRGSI LDRLIRALGG TGRVRKEVER SGLFASRTQE AAFRKLEAAA PLVTEAHHAP VPVVTHSSTP LALNSPSIVR REAILGRNTR VAGYVFSLVY QANARVQASS VSVQRLYDQV LLRNLQAIGI RRLLEHRLAF IDVSASSLET PVVEEMPAQG TVYLFGANDG LARPHNATLA RLRAKGYRIG LRSRGATPMP GLDQLDFLLI DIAAGDLPSI RDQMQAAVAR APKIRFVAAN VQTQEEYRAC AGLPFSYYQG PFITSREQLD GPVVDAGRAR ILEVLNALRG DAEVGELAAL IKQNLALSYK LLRYINSPGM GLSRTIVAPE PALLVLGRQK LYRWLAILLF TSGKTPGLDW AVMENALVRA RLAELLAECT GDLTPGERDE LFVAGMFSLL DVVLSAPLDA VLQKVKLPAP VSDALLEREG KYAPYLALAI ACEESDDLNI ATLAQGIGLD MWRVNSFHLD AMLWAQQIGD
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