Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2153 |
Symbol | |
ID | 3671934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2239499 |
End bp | 2241790 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637710857 |
Product | Elongator protein 3/MiaB/NifB |
Protein accession | YP_315911 |
Protein GI | 74318171 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.157967 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAACG CACTTTTTTC CCACCGCAAG CACTGGGCCG CGCGCTTCGG CACCGCGCCC TTCCTGCCGA TGTCGCGCGC CGAGATGGCC GCGCTCGGCT GGGACGCCTG CGACGTGATT CTCGTCGCCG GCGACGCCTA CATCGACCAC CCGAGCTTCG GCATGGCGCT GGTCGGCCGA CTGCTCGAAG CCCAGGGCTA CCGTGTCGGC ATCATCAGCC AGCCCGACTG GCACTCGGCC GACGCCTTCC GCGTGCTCGG CCAGCCGACG CTGTATTTCG GCGTCACGGC CGGCAACATG GACTCGATGG TCAACCGCTA CACGTCGGAC CGCAAGATCC GCTCGGACGA CGCGTACACG GCCAATGCCG AGCCGAACAA GCGGCCCGAC CGTGCCGTCA CGGTCTACGC GCAGCGCTGC CGCGAAGCCT TCCCGGGTAC GCCGGTCATC ATCGGCTCGA TCGAGGCGAG CCTGCGCCGC ATCGCGCACT ACGACTACTG GTCCGACACC GTACGTCGCT CGGTCCTGCC GGACTCCAAG GCCGATCTGC TGATCTTCGG CAACGCCGAG CGGGCCTTGC TCGACATCTC GCATCGTCTC GCCAAGGGCG AAAACATCGC CGACATCCGC GACGTGCGTG GGACCGGCTT CATGGTGGCG CGCGACTGGA AACCGGACGA GGCATGGATC GAGGTCCTCT CGACCGAGCT CGACACGCCG GGCGCGATCG ACGCCCACGT CGATCCCTAC GCGATGACAC CGGCCGGCCC CACCGCGCAG ACACCCGAAG GCACCGCTTC AATCAAAACG GCGCCGGTGC GCATCGTGCC GAAGGCCGAG CGCCTCGCTG CACGCCAGGA GTTGCGCGCG CGCACGGTCA TCCGTCTGCC CGACTACGAC CAGGTCAGGA ACAATCCCGC GCTCTACGCG CACGCGTCGC GCGTATTCCA TCTTGAATCG AACCCCGGCA ACGCGCGCGC GCTGCGTCAG GGCCACGGCG AGCGCGACGT CTGGCTCAAC CCGCCGCCGA TTCCGCTGAC CACGCCCGAG ATGGACGCGG TCTACGACCT GCCCTACGCA CGCGCGCCGC ATCCGAGCTA CGGCGACGCC AAGATCCCGG CGTGGGAGAT GATCCGCTTC TCGATCAACA TCATGCGCGG CTGCTTCGGC GGCTGCACCT TCTGCTCGAT CACCGAACAC GAGGGGCGCA TCATCCAGAG CCGTTCGGAA GATTCGGTGA TCCGCGAGAT CGAGGCGATC CGCGACAAGA CGCCGGGCTT CACGGGCGTC ATTTCCGACC TCGGCGGACC GACCGCGAAC ATGTACCGCA TGGCGTGCAA GTCCAAGCAG ATCGAGCAGT CCTGCCGCCG CCTGTCGTGC GTGTTCCCGG ACATCTGCGA GAACATGACC ACCGACCACA CGCCGCTGAT CCAGATGTAT CGGCGTGCGC GCGCGGTTCC CGGCATCAAG AAGATCCAGA TCAGCTCGGG CCTCCGATAC GACCTCGCCG TGCGCTCGCC GGAATACGTC AAGGAACTGG TGCAGCACCA CGTCGGCGGC TATCTCAAGA TCGCGCCCGA GCACACCGAA GCCGGCCCGC TGTCGAAGAT GATGAAGCCC GGCATGGGCG CCTACGAGCG CTTCAAGGAC ATGTTCGAAG CCGCGTCGAA GGCGGTCGGC AAGAAGCAGT ACCTGATCCC TTACTTCATC GCGGCGCACC CGGGAACGAC CGACGAGGAC ATGCTGAACC TCGCGCTGTG GCTGAAGAAG CACGACTTCC GTCTCGATCA GGTGCAGACC TTCCTGCCGA CGCCGATGGC GCTCGCGACG GCGATGTATC ACACCGAAAA GAACCCGCTG AAAAAGGTGC TCGGCGGCAA GGCCGAGACC GTGCCGGTCG TGCGCCAGGG CCGTACGCGG CGCCTGCACA AGGCCTTTCT GCGTTACCAC GATCCCGACA ACTGGCCGCT GCTGCGCCAG GCGCTCAAGG ACATGGGGCG CGAAGACCTG ATCGGCAACG GCAAGAAACA CCTGATCCCG CTCTACCAAC CTGCCGGCAC GGGCCGACAG CCCGAGGGCG CGCGCAGTCC CTGTGCGGCG CGCGCGGCGT CGGGCCAAGC CCACGGATCG AAGGCCGGCG CCGGCAAGCC CGCGGCAAAC AAGGCCGCTG CGGTCAACAC GAGCGCCAGC AAACCGAGCG CCGGCAAGCC CGCGCCCGCC AGCCGCGGAC GGCCGCCGCA GGTGCCCAAG CATCCGCTGA GCCAGCGGCG CGGTGGCGGC AAGTCGCGCT GA
|
Protein sequence | MTNALFSHRK HWAARFGTAP FLPMSRAEMA ALGWDACDVI LVAGDAYIDH PSFGMALVGR LLEAQGYRVG IISQPDWHSA DAFRVLGQPT LYFGVTAGNM DSMVNRYTSD RKIRSDDAYT ANAEPNKRPD RAVTVYAQRC REAFPGTPVI IGSIEASLRR IAHYDYWSDT VRRSVLPDSK ADLLIFGNAE RALLDISHRL AKGENIADIR DVRGTGFMVA RDWKPDEAWI EVLSTELDTP GAIDAHVDPY AMTPAGPTAQ TPEGTASIKT APVRIVPKAE RLAARQELRA RTVIRLPDYD QVRNNPALYA HASRVFHLES NPGNARALRQ GHGERDVWLN PPPIPLTTPE MDAVYDLPYA RAPHPSYGDA KIPAWEMIRF SINIMRGCFG GCTFCSITEH EGRIIQSRSE DSVIREIEAI RDKTPGFTGV ISDLGGPTAN MYRMACKSKQ IEQSCRRLSC VFPDICENMT TDHTPLIQMY RRARAVPGIK KIQISSGLRY DLAVRSPEYV KELVQHHVGG YLKIAPEHTE AGPLSKMMKP GMGAYERFKD MFEAASKAVG KKQYLIPYFI AAHPGTTDED MLNLALWLKK HDFRLDQVQT FLPTPMALAT AMYHTEKNPL KKVLGGKAET VPVVRQGRTR RLHKAFLRYH DPDNWPLLRQ ALKDMGREDL IGNGKKHLIP LYQPAGTGRQ PEGARSPCAA RAASGQAHGS KAGAGKPAAN KAAAVNTSAS KPSAGKPAPA SRGRPPQVPK HPLSQRRGGG KSR
|
| |