Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tbd_2150 |
Symbol | |
ID | 3671931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thiobacillus denitrificans ATCC 25259 |
Kingdom | Bacteria |
Replicon accession | NC_007404 |
Strand | + |
Start bp | 2237069 |
End bp | 2237608 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637710854 |
Product | TRAP transporter, small subunit |
Protein accession | YP_315908 |
Protein GI | 74318168 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.2063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGC TGCTTGCGCT GGCCGGCCGG ATCGACGCAC TGACCGAACG CGTCGGGCGC ATCGTGATCT GGCTGGTTCT CGTGGCCACG CTCATTTCCG CCGGCAATGC GCTGGTGCGT CACCTCGCCG GCGAGAGTTC GAACGCCTGG CTCGAAATCC AGTGGTATCT CTTCGGCGCA ATGTTCATGC TCGGCGCCGG CTACACGCTC AAGCACAACG GCCACGTGCG CATCGACATC TTCTACAACC GCTGCGGCGC GCGCGGCCGC GCCTGGATCG ATCTCGCCGG CGGCGGGCTG TTCCTGCTGC CGATGGCCGT GCTGCTCGCC TGGCTGTCCT GGCCGATGTT CCACGAAGCC TGGACGACGC GCGAATTGTC GCCCGACGCC GGCGGCCTCG TGCGCTGGCC GGTCAAGCTG CTCTTGCCGC TCGGCTTCGC GCTGCTCGCG CTGCAGGGTA TCGCCGAAAT CATCAAGCGC GTCGGCGTGC TGCGCGGCGA TCTCGTGATG CCCGCGGAAG CGCCCGACGA GGAGGTGTGA
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Protein sequence | MKTLLALAGR IDALTERVGR IVIWLVLVAT LISAGNALVR HLAGESSNAW LEIQWYLFGA MFMLGAGYTL KHNGHVRIDI FYNRCGARGR AWIDLAGGGL FLLPMAVLLA WLSWPMFHEA WTTRELSPDA GGLVRWPVKL LLPLGFALLA LQGIAEIIKR VGVLRGDLVM PAEAPDEEV
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