| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbd_2106 |
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| Symbol | |
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| ID | 3672878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thiobacillus denitrificans ATCC 25259 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007404 |
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| Strand | - |
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| Start bp | 2194463 |
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| End bp | 2196706 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637710809 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_315864 |
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| Protein GI | 74318124 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.543581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCC GTTTTCCCGT TGTCATCATC GACGAAGATT TCCGTTCGGA AAACGCGTCC
GGCCTCGGTA TACGGGCGCT CGCCGAAGCG ATCGAAAAAG AGGGTATGGA GGTGCTGGGC
GTCACGAACT ACGGCGACTT GACGTCGTTC GCCCAGCAAC AGGCGCGTGC GTCAGCCTTC
ATCCTCTCGA TCGACGACGA GGAACTCGGG GGCACCGCCG AGGACGCGAC GGCAGCGCTC
GACAAACTGC GCGGCTTCGT CGAGGAAGTG CGCTTCCGCA ACGGCGAGAT TCCGATCTTC
CTGCACGGCG AGACGCGTAC CGCGCGACAT ATCCCGAACG ACATCCTGCG CGAGCTCAAC
GGCTTCATCC ACATGCTGGA AGACACGCCC GAGTTCCTCG CCCGCTACAT CGCGCGCGAG
GCCCGCGCCT ATCTCGATTC GCTGGTGCCG CCGTTCTTTC GCGCGCTCAC CCATTACGCC
GCCGACGGCT CGTATTCGTG GCACTGCCCC GGTCACTCGG GCGGCGTCGC CTTCCTCAAG
TCGCCGATCG GCCAGATGTT CCACCAGTTC TTCGGTGAAA ACCTGCTGCG CGCCGACGTC
TGCAACGCCG TCGACGAACT CGGCCAGCTG CTCGACCACA CCGGCCCGGT CGCCGCGTCG
GAGCGCAATG CCGCGCGTAT CTTCAATTGC GACCATCTCT TCTTCGTCAC CAACGGCACC
TCGTCGTCGA ACAAGATGGT GTGGCATGCG ACGGTCGCGC CCGGCGACAT CGTCGTCGTC
GACCGCAACT GCCATAAATC GATCCTGCAC GCGATCATGA TGTGCGGGGC GATCCCGATC
TTCCTCACCC CGACGCGCAA CCACTACGGC ATCATCGGGC CGATCCCGAT GGACGAGTTC
CGCCCGGAGA ACATCGAGAA GAAAATCGCC GCGCATCCCT TTGCCAAGGA GGTCAAGGGG
CGGCCGCGCA TCCTCACGAT CACCCAGTCG ACCTACGACG GCATCCTCTA CAACGTCGAC
ATGATCAAGG AGTTGCTCGG CGACTATATC GACACGCTGC ATTTCGACGA GGCCTGGCTG
CCGCACGCGA CCTTCCACGA TTTCTACCGT GGCATGCACG CGATCGGCAA GGACCGCCCA
CGCGCCAAGG ACGCGCTGGT GTTTGCGACC CAGTCGACGC ACAAGCTTCT GGCCGGCCTG
AGTCAGGCGT CGCAGATCCT GGTGCAGGAT TCCGAGACGC GCAAGCTCGA CTTCCATCGT
TTCAACGAAG CCTATCTGAT GCACATGTCG ACTTCGCCCC AGTACGCGAT CATCGCGTCG
TGCGACGTCG CCGCCGCGAT GATGGAGCCG CCCGGCGGCC CGGCGCTGGT CGAGGAGTCG
ATCCGCGAGG CGCTGGATTT CCGCCGCGCG ATGCGCAAGG TCGACGAGGA ATTCGGCGAC
TCCTGGTGGT TCAAGGTCTG GGGGCCCGAG AAGCTCGCCG AGGAGGGCGT CGGCGACCGC
GAGGACTGGA TGCTCGAAGC GGGCGCGCGC TGGCACGAGT TCGGCAAGAT CGTGCCCGGC
TTCAACATGC TCGACCCGAT CAAGGCGACG GTCATCACCC CCGGGCTCGA CGTCGACGGC
GCGTTCGCCG ACTGGGGGAT TCCGGCCGCG ATCGTCACCA AGTACCTCGC CGAGCACGGC
GTCATCGTCG AGAAAACCGG ACTTTATTCC TTCTTCATCA TGTTCACGAT CGGCATCACC
AAGGGCCGCT GGAACACGCT GGTGACGGCG TTGCAGCAGT TCAAGGCCGA CTACGACGAG
AACCAGCCGC TATGGCGCGT GCTGCCCGAG TTCATCGAGA AGCACCCGCG CTACGAGAAG
ACCGGCCTCA AGGATCTTTG CGACCAGATC CACGCGATAT ACAAGGCCAA GGACGTCGCA
CGGCTCACCA CCGAAATGTA CCTCTCCGAG ATGGCGCCCG CGATGCGTCC GGCCGAGGCC
TTCGCGAAGA TGGCGCATCG CGAGATCGAA CGCGTCGACG TCGACGCCCT CGAGGGACGC
ATCACGGCCA TGCTCGTGAC GCCGTATCCG CCCGGCATCC CGTTGCTGAT TCCCGGCGAG
CGCTTCAACG CCACGATCGT GCGCTACCTG CAGTTCACGC GCGACTTCAA CGAGAAATTC
CCGGGCTTCG AGAGCGACGT CCACGGTCTC GTCGAAGATA TAGTCGATGG CAAGGCCCGC
TATTACGTCG ACTGCGTGAT TTGA
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| Protein sequence | MRFRFPVVII DEDFRSENAS GLGIRALAEA IEKEGMEVLG VTNYGDLTSF AQQQARASAF
ILSIDDEELG GTAEDATAAL DKLRGFVEEV RFRNGEIPIF LHGETRTARH IPNDILRELN
GFIHMLEDTP EFLARYIARE ARAYLDSLVP PFFRALTHYA ADGSYSWHCP GHSGGVAFLK
SPIGQMFHQF FGENLLRADV CNAVDELGQL LDHTGPVAAS ERNAARIFNC DHLFFVTNGT
SSSNKMVWHA TVAPGDIVVV DRNCHKSILH AIMMCGAIPI FLTPTRNHYG IIGPIPMDEF
RPENIEKKIA AHPFAKEVKG RPRILTITQS TYDGILYNVD MIKELLGDYI DTLHFDEAWL
PHATFHDFYR GMHAIGKDRP RAKDALVFAT QSTHKLLAGL SQASQILVQD SETRKLDFHR
FNEAYLMHMS TSPQYAIIAS CDVAAAMMEP PGGPALVEES IREALDFRRA MRKVDEEFGD
SWWFKVWGPE KLAEEGVGDR EDWMLEAGAR WHEFGKIVPG FNMLDPIKAT VITPGLDVDG
AFADWGIPAA IVTKYLAEHG VIVEKTGLYS FFIMFTIGIT KGRWNTLVTA LQQFKADYDE
NQPLWRVLPE FIEKHPRYEK TGLKDLCDQI HAIYKAKDVA RLTTEMYLSE MAPAMRPAEA
FAKMAHREIE RVDVDALEGR ITAMLVTPYP PGIPLLIPGE RFNATIVRYL QFTRDFNEKF
PGFESDVHGL VEDIVDGKAR YYVDCVI
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